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Lj6g3v2193470.1

Overview

Field Value
Gene ID Lj6g3v2193470
Transcript ID Lj6g3v2193470.1
Lotus japonicus genome version MG20 v3.0
Description Magnesium-dependent phosphatase [Medicago truncatula] gi|357445983|ref|XP_003593269.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 4 176 173 4.40E-92
PANTHER 4 176 173 4.40E-92
Gene3D 23 166 144 1.60E-43
SUPERFAMILY 24 155 132 7.34E-23
TIGRFAM 25 140 116 5.80E-12
CDD 26 147 122 6.34E-09
Pfam 48 165 118 4.40E-28

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj6g3v2193470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v2193470.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.