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LotjaGi4g1v0039200.1

Overview

Field Value
Gene ID LotjaGi4g1v0039200
Transcript ID LotjaGi4g1v0039200.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Magnesium-dependent phosphatase 1; TAIR: AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1; TrEMBL-Plants: tr|I3T080|I3T080_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0039200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:4696596..4705186) extracted from Lotus japonicus Gifu genome v1.2.

TAATAAATATAGTATTATTCTTTATAACTCGACATAAAGTACATGTACCTACAGTGCCTCTCACTATAAGTTTTTACTCT TAAACAGCTAAACTCTGCCACCAGTACAGGTATACAAGCAAATGAGTTCAGGTGTGAAGAACAACAGTTTCTCCTTCAGG AATATATTAAGCAATCGTTATATATATTATTCATATATTACAGTTACATGCACACCATAGAACTAAGGTAGCAATAGATG AAAAGTAGCATCACACTTGTGGCTTACCATAGATTTATGAAATACAATAATAAATTGCAAAGAGAGGCCAAGAGGTACAG GTTTTATGATTCCTTAGCTTCCTAACTTAAAAGCATCTACAAAGAGTCCCAAGCATATGCCTGCTTTCCAGTAGTTCAAC ATCAATAGAAAAGACTGCAACCTCCCGGTCCTCACTGTAGGTGGCTTTCGATATAGTAGCATACCAATTCCCTCAATGGC AGCCACCACAACACCAGCAACCAGAACATCCCAATCACCAGTTTGCCCGAGGATTGTAGCTAGTGCGTTTGCCGTGTAGA AACCCAAAAGTAGCAGGAATATTTTCATAGGGACGTTCTTCCTCGCAGAGTTCAGCTTATCTAGAAGTTGTCTGCCACCT GCAGACAGTATCCTACCCAATCGAGTGCCGCCAAAACTGGAACTGGTATCGTTGAGACTTTGTTGCTCACCGTTACCAGG CACTCCACCTGTGTTCAAGGCAAAAGCTATTTTCCACACAGCTTTTCTCCCCAGGAAACTGAACCAAGGTAAATTGATAT TGCATTAGTAAGAAATAGCTATTTTATTCCTTTAGTAGTAAAAATAGAAACACCCAAAAAATCCAGTCAATTAAAACAAC ACCATCAATTAGAGTATTAGACTTCTGATTTCTGAAATCATCCTTATTTATCGTGCCATAGAGAAGTATTCTATGGAAAG AAAAAAAAAAAAATATGCATTTGGATAGCTCCAAAGGCTTTTTTCTTACATCGTGGAGTCCACTATATAAATCAAATGAT GGCATTATGTTTTGTAAAAACCAATTCTTCAGAGGCCATTCAAAAATAAATCCTTTCTATTGGTTTAACTCGCAATTTTT TGCGGGTCTATCATTAACTCTTATTAAGTTATCATTCATTGATCATTAAGCATTAACTCTTTTAACAGGGGGTTCTATTG TCTTCTTACATGATGAACTATTATTAATCAAAGAATTATATGAAGACAATAAAATAAAATAAAATAAAATAAGGACTTAT TATATTGATTTTGGAACAGTGGAAAATAGAAAGGTTAAATAAGTTCATTTACCCGCTCTGAGGAAAATGTGAAGACTTCC CGCCAGCATTAGAAGTTAGTCCACTAAGAATTGGCTCACAGCAACAACCATGAACCCTTGAAGCTGAAAAGGCTGTATAT GGTTTTTTAGAGCTTTCATGCTCTGTAATTGATAATCTCCACTGCAGATTCATAGATCCCATTTGACAAGCCATCTATTA CAAACAGCAATTTTAAACCAGTTCTGCAAATCTTCAGATCTGTGTATACTGATCTCGCCTTTTCAGGCTCCTAATCTGCA TAAGTTCAACGTTTTAAAAAGTTATATGCAGTGCTTGGCATGATGCATCACCCATTGAACACTAAATCAACATGAGTTAA ACTTCAAACTAGAATATATTGGATTAAATTTATTGATGTAATCTGGAGGGGCATGTAATTGGCAGCCACACCCTGTAAAT ATCATTCATGATAAGGGGCCAGGGGGCCCAAAAACATCTATGCAAACTTTTTTATTATCATATATGTCATACTATGTTTC GTGGGAAACATATTTGATTCAGAGATACATCCTTTTATCAAAGTATCATTAGTTTTTTTAGCAATAAACTCGCAAAAGAT ATAATTTATTTAGCACACCAATGAAGTATAAGAAAATTATTCTAAAACCACTACCCCTTTAACAAATGGGTATGCGAAGA TCAAACCAGAGTCTCTGAAACAGAGGCTGAAGCAACAAACTAAAATATACCCATTTCCGGTGCACTCAAGGGTAGTTAGC ATTCTACAATTCAACCATGGTTCTTCTTCTAAACTTTTGAATGTGCATCTTCAAAGTGGTTGAAAATTACATGAGAAACA AATAGCAATTTATTAATCTATAGAAACCACAAGGTATACACTTGCATTTTTCCTCTCGCTACATACTCGTTAGTGGATGG GCTTGGGCAGGACTACATGCCACAGCAACCTTATAGTATGCATTAGTACTATGAATCACTTAAAGATTATAAAGGGGCAT GTATTGCATACAGCTGATGAGGTTTCAAGTTTTCTACGGCAATGTAAATTGTAAACTGTCCCAAACTTTCAAGAATATAA ATTTCTAAATCTATGGCTAGGCTTCTATGTGACTAGACCCCGTTTGGAAGAGCTTATTTGAGATTATCTTATAGCATAAG TGCTTAAGCAAGTGTTTGGCAGAGCTTATGTTGATAGCATATGACCTACCTACAAGCTGTTTTAAGCTTTTTCCCATAAG CTGTATAAAACAGCATATGAATAAGTGCTTATGCCTAACTATTTTGAGGTTATTTCAATAAGCCTCTCAAATTAGCTAAT GAATATGCGCATAAACATAAACATAAACGTAAGCGCTTAATTAAGTTGTTAGCCCAAACGCACCCTAAGTCTACACCGTA GCTTATAAGAATACTTGGTGTGGATACACACTTATTATTTTGGAAAGTGCTAATGGAAATGAGGCAGTGTGTTTGGAGGC ATTCAGCAATTAAGTGAATAGCATAGAAAATGCATAAATAAAAACCCCTGACACCTAAAAGCCAGTTGGGTAACAGAATA ATTGAATGCAAGGAAATATCTAGTAGAGATTGAAATGGGTTGGGATAAAATAATAATACCAATTCCAGAATATGCAGAAT CCATAGCTCAAAGCAGTAATGACATGTGTGCATTGTAGGCATGGAAGTGTGTGAGAGAGAGAGAGAGTTGTAGCGTTACC TTGTTGAAGAGAGGATGATGATAACCGGTGACCGGAAGCGGAGAGGGGAAGAGGATCATACAGGCTACACAGTAACATGA AACCTTGTATTCGACAACACTTATGAATCACTGATGATGGCAGTTCCAATTTGGATCAGCCCACTCTCCTTCGGACCGGT CTGATTGGGTCGGTCGGGTATGTTTAAATTGAAGCAATAATTTATTACTTTAATTAAAAACAAATTGTGTAAGTTTCTTT CACTTATAATCATTCACATATATTAATTAAGTACATATATACCAACCCAACACAGGATAGTTAAGAACCATCGGTACATC ATCCAATTGGAGAGACTGAGAGAGAGAGATGGAGGATGTGGAGAAGGTGAAAGCAGAGGCACTGCAAATGATGGGAGTAT TCCAAGTGCTACCAAGGCTCGTTGTTTTCGATCTTGATTACACTCTTTGGCCTTTCTACTGGTACACACACATCTCTCTT TCCCTTATCTCTTCTTTTCCTACTTAGCTTCTTCTTTCTGGTTTTACCACTTCACCAATGCACACAAGACCATATAATCC TATATGCTAAGTGTGTCTTCATTATAAGTAAAACTTTAGAGTATCTGAAGATGTGTGTGCAACTTTCAGTGAGTGCCGCT CCAAGCGGGACACACCTTCTTTGTACCCTCATGTCAAAGGCATCATGTATGCGCTCAAAGGTGAGGGGATTGATGTTGCC ATTGCTTCTAAATCACCAACTCCTGACATAGCAACAACGTTTCTTGACAAACTCAGCATCAGCTCAATGTTTGTTACCAA GGTGTGTTGTGTTCTCAATCATATAGTTCTGTGGTTGTGCATTTATTTCATAAAAGGAAGTTCTACTAATGAATATTGTT ATATCATTAGGACTGACTTGTTGAAAGTAGTTTTCCAGTAGAGACACACACATTTTTGCAGCTGAAATACTTACATACAC TAACATCACTTTAAAAAAAAACCCTTTTTCAAAGTATATATGCTTCTGATCTTTTGTGTTGACAACATTCAATTCATGTT TCTGATTGTGCAGGAAATATTTTACAGCTGGCAAAACAAAACAGATCATTTTCAGAAAATCCATTCAAGCACTGGGGTGC CCTTTAAATCAATGCTCTTCTTTGATGATGATGATAATAACATTCAAGGGGTAACAGAGATGCGTCTATCAATCTCTCTT TTTCTTGATGAAGTTTCTTAATATTTTTATTTGTCAATGCTAGCTTCCTCATTTTCAACTTAGTCCTAACTCCTAAGCTA AAAAATTTGAAGAAATTATGTTTGAGTTTGTTATGCTTCTTTTAATGTGTTTATATAGCCGAAAGTTCCAGACTTACGAA ATCATAATCCTAATGTCATAGAAGTTGCATTTAAGTGATTAGGCTTTGACACAGATTTGTGTTATTTTCTTTGATGGCAT CTTGAATGGTGGGGTTATTGTTGTACATGGAATCAATAGTTTTCATACCAGATTTGATCATGGTTTCTTGTTGAAATTCT GTAGGGACTTGGGTGTGGATTTTTCTGTTTAAAGAATTTCTCAACTGTATTCTTTTTCTTTCGGAATTAACAGTTTTGGA TGTGGTACAATTTGGTGTTCTCTCTTTTCCTGTTTTGAAAGGGGAAAAAAAGATTAATCTGTCATATATATATGTAACAT GAATTGCAGTGGCAATTACAGGTCTCAAAAATGGGAGTAACAAGCATTTTGGTCAGGAATGGGGTAAACCTTGGAGTCTA TAAAGAAGGCCTTACAAAATTTTCTCTAAAGTGGGATGCATCAAAGGACAAGCAGGGAAGGCGTAAGTAACACTCTCAGG AACGCAGATACTTCGAACACGATGATGCATGAAATTGAATATCCAAATAAGTTTCCCTATCTGCATTTATATAGAACCAC ATGAACTGAATGTATACCTTGAAGCATTTTTAATATAAAACGTAGATGTATATCTTGTTGAATGAAAATCTCATAATGCT AGACATTAAAAATTTGAGTATTTAGATTTCAACCAAGTAAAAACAATTTCCATGCTGATGTACTGTGAACTGTTTTATAG AGTGATGAGTCTGTCATCTAACAAAAGTTGCAAACAAATATTACGTAGTATATTTACAAAAATAGGCTCATACCCTATCC TGAAATAACAAAATTACATAGCTACAAAGAATGAACAAACAATCGACAATGTCATAAACATATTCGTAGGTGAATCTTTG CGATGGATCAATTTCAGCAGGCAGCACAACTTATTTCAAAAAGATACAGTTTTAAACTCTTTCTGCAAGGAGTAGTTGTT CAAGTTCCGCTTTGCGCCGTTCCAATTCCTGCAAGTGTCCATAAAACAAGTAAATACAGCAAGGTTTTTCTCAGTAAAAC ATGATTTTTTATAAAATGGAGATGAAAAGCCACTGAGAGATGTAAAACAGTCAATTTTCTTAGTGAAGATTGAAAAATGT TCATGGTCTTGGTCATTGTATCCAAATCTGCACTAATGATAATGGACTTGTAAAGGGAAAGCACTATTACAACTACGTTA ATACAAATTTATTTGAACAACTAGTAGGTAGAGTCCAGTACACAATATTCTTAAATCATATGTTCAACTCTTCATTGTCT TCAGAATTTAAAATGCCAAACCATATGCATCTATCATTACTATGATTGAAATCTTTTAGATCTCTTTAGTGCATACGTTT TCTCATCATGCACAGTACATTATCAGGTAATCAGGGTCACCCATCATGTCACAATTAGAGCATTATTATGATATCATTGC AACTCAGGAATCATAACTTATATAATAGACATGCAAATGGAAATAATGAGATTAAATTGTAAAATCTGAGCATAGCATCA TACCTCCAAATCCTTGGCTGCTTGCTCTGTTGTAATTGCCTGCTTCTGACGAGCACGTTTAAGAAAACCAATGCACAGGA CTCCCTTCAAATAATAAAACAATGAAAGCAGACAAAATGTCAGGTTTTTTTTCATACAAAGTAGAGAAGATATTACTAGA GGATTCATTAAGAAAAGTTACAGAAGAAAAAAGAAGAGTGAGCATAACCTATTACAAAAATCATTTCAACTCTGTCCCAC AAAAGGTATATCAAACAAAGGCATTGGGAGATGAAATAAAATATCTAGTCTCCTGGGCAATAGAACACTATATGCAAATT AAAATATCTTGGAATAAAAACTGTTTTCTGTTTGGAAAAATAATAATTAAAGGAACTATTGAAGTCATACATTTGACAAT ATTTGAGCTCAGATTGATTGTACTGTATTACATACCTACTATATAGCCAAGTCAACAGAAAAGCTACATATAATAAAATT AAATATTTGTAATTTTTTTTTTGAAAGAATCAAATTATTTTGTACTGCATATAAACATACTTTGAGAACATACTGTGAAG TGTGAAACAGTTCAACATACAGAACATATAAAATTGAAGTAATAAAATCTCTTCAATAATCTTACTGAAATAAGATAAAC AAAGCCACATGCAAGAAGCAAATAGCTCGCTATGTTCTGAAGAAGAATAATCCACTCGCGCGCCCTAGTATAGTCAGGGA AAGCCCTTGTCATGACTCCAACACTGCAGAAATAAAACCACAAGTTAGAAACAAAACCACACAGTTCATGCATCATGAAG TCAACAGATATCTTTCCAACTTGGGTTCTTTCTACAACATTTCTCGACACTCTAAATAGTCCTCCAAAAAAGAGAGTAGT ACACAAGCTTCAGTGAAATTAGAGATTATACGCCTAACGTTAAATCCTAAAACATAAATCCATGGAAGCTACAATTTTAT CACTCAGACTGTAATTTTCCATTATCTAGTTTTTACCTTCCATTACTCAGGTTTGTAATTTTAAAATCAATCCCAATTTT TAGACACCAATAACACCTCCATCTCTAATTTATCTAATTTCATTGCTCTTCATATCACCTCACATTTATCTAATTCCAAT CAAGTGTCTATCAGCTATTTGCATTTTGGAAAAGTAATATAGAATTCCCTTCTTAAGGGAGTATCAAAGTAAACAGCAAG CACATGTTGTCTCACTCCGTAATGACAAATCACTTCCTCTTATAATGTTGTGTGAGAGTTGTGTTGGTGGGCAATCAGGC ATGCTCTCATGTGGTGGTAACCGAAGCGGAACTCACCCAAATTTTTATGTACCGAAATGAGTATCAAAGTAAACCCCTAT AATTAATGTAGCTCAATACATAAATTAAGCACAAACATTTACCAGCAAAACTCCCATAATCACCCTCTTACAGAATGCAA TTAAAAAGCATTACAGTATTTTTAACTTTGAACCTGAACATGTATTCTCATTATCAACTAAGAAATTGTACATATATAAG CCCAAACTAAGCTGTGAGTGAGTGAGTATGCCAAAATCACCATGATCCAGTGGTGACAACAAGTAAGCAAAAGAATTGTG AGTAAATCAAATTACATACAAGATTTGCAGCATGCCCCTTGCAGCCCAATACTCCAAAACCTGCAGCAAATGATTGATCG ATAAAATTGTGATATGAATGATGAAATAGAGAGTTAAAGAAGAAATGAAAACGAAACCTGAGAGAATTTGATGATGAAAC TCCACTCAGTCTCAGCGAGGACAACGAAAGCTGCAATCACAACCGCGTAACAGCGAAAAATACCATCGAAAATCTGAAGA AAACAGCAAATCAACAACATTGATTGATGAGAAGGAAAGCGATTGAAAATTGAGAGGGTTGGTTACGTACATCAGATGCG TTTTTGAAGGAACGAACAGCGGAGAGGACATTGACGGCGATGCAGAGAATGGCAGCCAAAGAGGTGATGACGCTGAAGCA CTTGCAGGTTACTAAGAACGGGTCTGTTCTGGCTCTCGTTCCGGTGGTTGTGGCGGTGGCGACGAGATTCTCTTCCTCTT CCTCTTCCTCTACCTCGCCGTTTCTGGCCATTTTCTTTCCGTTCTCCGGTGGAAAATAGAAGGAAGTGTTGTTGGTTGGA AGAATGGAAATATGGAATGGTAGTTGAGGTTTGGAAAATTGGAATCTGTTAGTTAATATATTGAATTGAATTCTCTCTCA CATTTTCTTTTTGTTTTTCTGTGTGCTCGGCATCAATCTGTGGCGTGAGTGAGTTTGCAACTTTGCATTGCTGGACTTTG ATTCTTCAACGCTTCAAGTGGCAAACCAACACGTGGCGCTTCAACTATTGGGTATGATTAACTCCCTCACTCAATGAGTA CGTGGAATGGAATGTTCCTACCACTTGAGCTATTTTACGGAGGCTTTAATATTTCTTTCTATGTGGTTTTTACCTAACCG CTTAAATTACCTTGCAGCTCGAGTTTAGAGAAATATTTGGTGAGTTGAGGAAAACACTTTTGAAGACAATGACTTTAAAT TTGTAAAATATATGGGAGTATGCCATCATGTTTTGACATTCTTATTTCGCAAGTTTGTAAAATATATGACTCCTTTAGTG GATTGTTCTATTTTACCTTTACTTCTTTTTC 

CDS sequence (LotjaGi4g1v0039200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGGATGTGGAGAAGGTGAAAGCAGAGGCACTGCAAATGATGGGAGTATTCCAAGTGCTACCAAGGCTCGTTGTTTT CGATCTTGATTACACTCTTTGGCCTTTCTACTGTGAGTGCCGCTCCAAGCGGGACACACCTTCTTTGTACCCTCATGTCA AAGGCATCATGTATGCGCTCAAAGGTGAGGGGATTGATGTTGCCATTGCTTCTAAATCACCAACTCCTGACATAGCAACA ACGTTTCTTGACAAACTCAGCATCAGCTCAATGTTTGTTACCAAGGAAATATTTTACAGCTGGCAAAACAAAACAGATCA TTTTCAGAAAATCCATTCAAGCACTGGGGTGCCCTTTAAATCAATGCTCTTCTTTGATGATGATGATAATAACATTCAAG GGGTCTCAAAAATGGGAGTAACAAGCATTTTGGTCAGGAATGGGGTAAACCTTGGAGTCTATAAAGAAGGCCTTACAAAA TTTTCTCTAAAGTGGGATGCATCAAAGGACAAGCAGGGAAGGCGTAAGTAA 

Protein sequence (LotjaGi4g1v0039200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEDVEKVKAEALQMMGVFQVLPRLVVFDLDYTLWPFYCECRSKRDTPSLYPHVKGIMYALKGEGIDVAIASKSPTPDIAT TFLDKLSISSMFVTKEIFYSWQNKTDHFQKIHSSTGVPFKSMLFFDDDDNNIQGVSKMGVTSILVRNGVNLGVYKEGLTK FSLKWDASKDKQGRRK 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 175 175 9.0E-99
PANTHER 1 175 175 9.0E-99
SFLD 5 168 164 0.0
SFLD 5 168 164 0.0
Gene3D 5 165 161 1.8E-46
Pfam 21 41 21 2.2E-6
CDD 22 145 124 6.06154E-50
SUPERFAMILY 23 157 135 1.05E-22
TIGRFAM 24 138 115 5.6E-13
Pfam 48 162 115 3.9E-27

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0039200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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