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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0162139 |
| Transcript ID | Lj0g3v0162139.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Zinc finger protein-related isoform 1 [Theobroma cacao] gi|508708206|gb|EOY00103.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 454 | 437 | 0 | – | |
| PANTHER | 18 | 454 | 437 | 0 | – | |
| Gene3D | 31 | 211 | 181 | 2.80E-39 | – | |
| CDD | 36 | 161 | 126 | 2.69E-26 | – | |
| Pfam | 38 | 163 | 126 | 1.80E-07 | ||
| Gene3D | 290 | 478 | 189 | 7.80E-49 | – | |
| Pfam | 292 | 423 | 132 | 1.60E-06 | ||
| CDD | 294 | 421 | 128 | 4.94E-16 | – | |
| PANTHER | 483 | 884 | 402 | 0 | – | |
| PANTHER | 483 | 884 | 402 | 0 | – | |
| Gene3D | 633 | 848 | 216 | 1.90E-34 | – | |
| CDD | 643 | 799 | 157 | 3.21E-21 | – | |
| PANTHER | 971 | 1158 | 188 | 0 | – | |
| PANTHER | 971 | 1158 | 188 | 0 | – | |
| ProSiteProfiles | 974 | 1043 | 70 | 26.217 | ||
| SUPERFAMILY | 974 | 1037 | 64 | 8.24E-18 | – | |
| Pfam | 981 | 1056 | 76 | 2.00E-19 | ||
| ProSiteProfiles | 1046 | 1109 | 64 | 28.585 | ||
| SUPERFAMILY | 1047 | 1102 | 56 | 3.66E-15 | – | |
| Gene3D | 1107 | 1153 | 47 | 1.30E-08 | ||
| Pfam | 1109 | 1151 | 43 | 1.90E-06 | ||
| SUPERFAMILY | 1109 | 1155 | 47 | 7.06E-07 | – | |
| ProSiteProfiles | 1110 | 1152 | 43 | 10.984 | ||
| SMART | 1110 | 1151 | 42 | 2.80E-05 | ||
| CDD | 1110 | 1151 | 42 | 0.00132902 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj0g3v0162139.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0162139.2, powered by CORGI.
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