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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0275969 |
| Transcript ID | Lj0g3v0275969.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | transcription factor C3H [Lotus japonicus] gi|193237583|dbj|BAG50068.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 39 | 39 | – | – | |
| Phobius | 1 | 39 | 39 | – | – | |
| SignalP | 1 | 39 | 39 | – | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| Phobius | 21 | 31 | 11 | – | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 32 | 39 | 8 | – | – | |
| Phobius | 40 | 54 | 15 | – | – | |
| PANTHER | 44 | 204 | 161 | 1.40E-36 | – | |
| TMHMM | 53 | 75 | 23 | – | – | |
| Phobius | 55 | 75 | 21 | – | – | |
| Phobius | 76 | 375 | 300 | – | – | |
| SUPERFAMILY | 130 | 185 | 56 | 3.28E-20 | – | |
| Gene3D | 134 | 181 | 48 | 3.40E-19 | ||
| Pfam | 135 | 178 | 44 | 1.90E-13 | ||
| CDD | 136 | 181 | 46 | 3.81E-11 | – | |
| SMART | 136 | 177 | 42 | 1.10E-06 | ||
| ProSiteProfiles | 136 | 178 | 43 | 12.475 | ||
| MobiDBLite | 205 | 245 | 41 | – | – | |
| MobiDBLite | 355 | 375 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0275969.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0275969.1, powered by CORGI.
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