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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0162139 |
| Transcript ID | Lj0g3v0162139.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Zinc finger protein-related isoform 1 [Theobroma cacao] gi|508708206|gb|EOY00103.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 268 | 268 | 0 | – | |
| PANTHER | 1 | 268 | 268 | 0 | – | |
| Gene3D | 104 | 292 | 189 | 6.40E-49 | – | |
| Pfam | 106 | 237 | 132 | 1.30E-06 | ||
| CDD | 108 | 235 | 128 | 1.50E-16 | – | |
| PANTHER | 297 | 698 | 402 | 0 | – | |
| PANTHER | 297 | 698 | 402 | 0 | – | |
| Gene3D | 447 | 662 | 216 | 1.50E-34 | – | |
| CDD | 457 | 613 | 157 | 8.85E-22 | – | |
| PANTHER | 785 | 1027 | 243 | 0 | – | |
| PANTHER | 785 | 1027 | 243 | 0 | – | |
| ProSiteProfiles | 788 | 857 | 70 | 26.217 | ||
| SUPERFAMILY | 788 | 851 | 64 | 7.72E-18 | – | |
| Pfam | 795 | 870 | 76 | 1.70E-19 | ||
| ProSiteProfiles | 860 | 923 | 64 | 28.585 | ||
| SUPERFAMILY | 861 | 916 | 56 | 3.14E-15 | – | |
| Gene3D | 921 | 971 | 51 | 2.30E-09 | ||
| SUPERFAMILY | 921 | 976 | 56 | 6.62E-08 | – | |
| Pfam | 923 | 965 | 43 | 1.70E-06 | ||
| CDD | 924 | 965 | 42 | 0.00178854 | – | |
| SMART | 924 | 965 | 42 | 2.80E-05 | ||
| ProSiteProfiles | 924 | 966 | 43 | 10.984 | ||
| Pfam | 970 | 1027 | 58 | 4.20E-24 | – | |
| Gene3D | 994 | 1027 | 34 | 1.60E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj0g3v0162139.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0162139.3, powered by CORGI.
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