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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR24067
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 59 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.036s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0109419.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like [Cicer arietinum] gi|502084478|ref|XP_004487698.1| chr0 47380844 47384855 -
1 domain prediction
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Lj0g3v0123939.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like [Cicer arietinum] gi|502141647|ref|XP_004504577.1| chr0 55610425 55611324 -
1 domain prediction
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Lj0g3v0168999.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 7-like [Fragaria vesca subsp]. vesca] gi|470116820|ref|XP_004294573.1| chr0 80719086 80722645 -
1 domain prediction
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Lj0g3v0203099.1
n.a. PREDICTED: SUMO-conjugating enzyme SCE1-like [Cicer arietinum] gi|502160781|ref|XP_004511894.1| chr0 100628043 100630600 -
1 domain prediction
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Lj0g3v0293369.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Cicer arietinum] gi|502157139|ref|XP_004510772.1| chr0 152271888 152275244 -
1 domain prediction
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Lj0g3v0299709.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 16-like [Cucumis sativus] gi|449457512|ref|XP_004146492.1| chr0 155712524 155714510 -
1 domain prediction
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Lj0g3v0304639.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like [Glycine max] gi|356542276|ref|XP_003539595.1| chr0 158661338 158665394 -
1 domain prediction
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Lj0g3v0326929.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like [Cicer arietinum] gi|502158688|ref|XP_004511247.1| chr0 170885437 170896727 +
1 domain prediction
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Lj0g3v0355129.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like [Cicer arietinum] gi|502141647|ref|XP_004504577.1| chr0 187040596 187041495 +
1 domain prediction
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Lj0g3v0355759.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 variant 1D-like isoform X3 [Cicer arietinum] gi|502122311|ref|XP_004497683.1| chr0 187379645 187382310 +
1 domain prediction
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Lj0g3v0362749.1
n.a. PREDICTED: transmembrane protein 189-like [Glycine max] gi|356567361|ref|XP_003551889.1| chr0 191290977 191291924 -
1 domain prediction
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Lj1g3v0465660.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 2-like isoform 1 [Solanum lycopersicum] gi|460391928|ref|XP_004241570.1| chr1 6223049 6229131 +
1 domain prediction
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Lj1g3v1466220.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 27-like isoform 1 [Glycine max] gi|356508845|ref|XP_003523164.1| chr1 17549155 17552308 -
1 domain prediction
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Lj1g3v1651360.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like [Glycine max] gi|356519922|ref|XP_003528617.1| chr1 19854737 19855657 -
1 domain prediction
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Lj1g3v2063210.1
n.a. PREDICTED: protein PEROXIN-4-like [Cicer arietinum] gi|502131980|ref|XP_004501180.1| chr1 24293601 24296517 +
1 domain prediction
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Lj1g3v2682550.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 5-like [Glycine max] gi|356560787|ref|XP_003548669.1| chr1 31224785 31229081 -
1 domain prediction
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Lj1g3v4047170.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 22-like [Cicer arietinum] gi|502107487|ref|XP_004493279.1| chr1 47726338 47730179 +
1 domain prediction
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Lj2g3v1803100.1
n.a. PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Cicer arietinum] gi|502161064|ref|XP_004512008.1| chr2 27264272 27269393 -
1 domain prediction
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Lj2g3v2089760.1
n.a. Ubiquitin carrier protein [Medicago truncatula] gi|357474045|ref|XP_003607307.1| chr2 31669794 31670709 +
1 domain prediction
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Lj2g3v3054240.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like [Glycine max] gi|356519922|ref|XP_003528617.1| chr2 39246531 39247502 -
1 domain prediction
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Lj3g3v0428400.1
n.a. ubiquitin-conjugating enzyme E2 36 [Arabidopsis thaliana] gi|18394416|ref|NP_564011.1| chr3 3907415 3911934 +
1 domain prediction
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Lj3g3v0428400.2
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 35-like [Solanum lycopersicum] gi|460397424|ref|XP_004244267.1| chr3 3907415 3912998 +
1 domain prediction
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Lj3g3v1061310.1
n.a. ubiquitin-conjugating enzyme E2 36 [Arabidopsis thaliana] gi|18394416|ref|NP_564011.1| chr3 14167069 14172311 -
1 domain prediction
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Lj3g3v1666180.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like [Glycine max] gi|356564644|ref|XP_003550561.1| chr3 21453000 21453516 +
1 domain prediction
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Lj3g3v1666210.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like [Glycine max] gi|356564644|ref|XP_003550561.1| chr3 21459543 21460229 +
1 domain prediction
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Lj3g3v2563430.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Glycine max] gi|356520176|ref|XP_003528740.1| chr3 31175413 31180075 -
1 domain prediction
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Lj3g3v3188470.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 7-like [Cicer arietinum] gi|502081948|ref|XP_004487019.1| chr3 39288190 39292474 -
1 domain prediction
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Lj3g3v3579350.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 20-like isoform X2 [Cicer arietinum] gi|502144341|ref|XP_004505662.1| chr3 43466527 43468277 +
1 domain prediction
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Lj4g3v0109540.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Cicer arietinum] gi|502118485|ref|XP_004496290.1| chr4 1001889 1004156 -
1 domain prediction
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Lj4g3v0109540.2
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Cicer arietinum] gi|502118485|ref|XP_004496290.1| chr4 1001889 1004156 -
1 domain prediction
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Lj4g3v0451220.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Glycine max] gi|356519588|ref|XP_003528454.1| chr4 6664914 6672209 -
1 domain prediction
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Lj4g3v0548810.1
n.a. ubiquitin-conjugating enzyme E2 36 [Arabidopsis thaliana] gi|18394416|ref|NP_564011.1| chr4 8940631 8945781 +
1 domain prediction
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Lj4g3v1535160.1
n.a. Ubiquitin-conjugating enzyme E2 5 isoform 1 [Theobroma cacao] gi|508773400|gb|EOY20656.1| chr4 23048876 23055800 -
1 domain prediction
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Lj4g3v1615840.1
n.a. Ubiquiting-conjugating enzyme 2 [Theobroma cacao] gi|508718611|gb|EOY10508.1| chr4 23812415 23816889 +
1 domain prediction
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Lj4g3v2215080.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like [Glycine max] gi|356519922|ref|XP_003528617.1| chr4 30518394 30518849 +
1 domain prediction
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Lj4g3v2267600.1
n.a. Ubiquitin carrier protein E2 [Medicago truncatula] gi|357478955|ref|XP_003609763.1| chr4 31623585 31625715 -
1 domain prediction
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Lj4g3v2267600.2
n.a. Ubiquitin carrier protein E2 [Medicago truncatula] gi|357478955|ref|XP_003609763.1| chr4 31623585 31644264 -
1 domain prediction
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Lj4g3v2435000.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 26-like [Glycine max] gi|356510847|ref|XP_003524145.1| chr4 33583874 33593939 +
1 domain prediction
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Lj4g3v2973630.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 5-like [Glycine max] gi|356513371|ref|XP_003525387.1| chr4 39323121 39325834 -
1 domain prediction
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Lj4g3v3112970.1
n.a. ubiquitin-conjugating enzyme 2 [Arachis hypogaea] gi|71040677|gb|AAZ20287.1| chr4 41482054 41485896 -
1 domain prediction
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Lj5g3v1827360.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Cicer arietinum] gi|502118485|ref|XP_004496290.1| chr5 26203711 26206754 -
1 domain prediction
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Lj6g3v0920100.1
n.a. PREDICTED: transmembrane protein 189-like [Cicer arietinum] gi|502128694|ref|XP_004500049.1| chr6 9150535 9152200 -
1 domain prediction
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Lj6g3v0920210.1
n.a. PREDICTED: transmembrane protein 189-like [Cicer arietinum] gi|502128694|ref|XP_004500049.1| chr6 9199299 9200625 -
1 domain prediction
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Lj6g3v1904540.1
n.a. PREDICTED: ubiquitin-conjugating enzyme E2 32-like [Glycine max] gi|356556010|ref|XP_003546320.1| chr6 21380013 21382602 -
1 domain prediction
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Lj6g3v2030860.1
n.a. PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Glycine max] gi|356555289|ref|XP_003545966.1| chr6 23993481 24003008 +
1 domain prediction
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LotjaGi1g1v0215800.1
n.a. Ubiquitin conjugating enzyme E2; TAIR: AT2G02760.1 ubiquiting-conjugating enzyme 2; Swiss-Prot: sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2; TrEMBL-Plants: tr|D7TND2|D7TND2_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0215800 LjG1.1_chr1 47563514 47570464 +
1 domain prediction
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LotjaGi1g1v0215800.2
n.a. Ubiquitin conjugating enzyme E2; TAIR: AT1G14400.1 ubiquitin carrier protein 1; Swiss-Prot: sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1; TrEMBL-Plants: tr|A0A1J7FPK6|A0A1J7FPK6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0215800 LjG1.1_chr1 47564053 47565503 +
1 domain prediction
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LotjaGi1g1v0215800.3
n.a. Ubiquitin conjugating enzyme E2; TAIR: AT2G02760.1 ubiquiting-conjugating enzyme 2; Swiss-Prot: sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2; TrEMBL-Plants: tr|D7TND2|D7TND2_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0215800 LjG1.1_chr1 47564053 47569683 +
1 domain prediction
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LotjaGi2g1v0371600.1
n.a. ubiquitin-conjugating enzyme E2; TAIR: AT5G59300.1 ubiquitin-conjugating enzyme E2; Swiss-Prot: sp|Q42540|UBC7_ARATH Ubiquitin-conjugating enzyme E2 7; TrEMBL-Plants: tr|C6SXY4|C6SXY4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0371600 LjG1.1_chr2 86827120 86832082 -
1 domain prediction
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LotjaGi2g1v0371600.2
n.a. ubiquitin-conjugating enzyme E2; TAIR: AT5G59300.1 ubiquitin-conjugating enzyme E2; Swiss-Prot: sp|Q42540|UBC7_ARATH Ubiquitin-conjugating enzyme E2 7; TrEMBL-Plants: tr|S8C1S5|S8C1S5_9LAMI Uncharacterized protein; Found in the gene: LotjaGi2g1v0371600 LjG1.1_chr2 86827786 86830894 -
1 domain prediction
 –