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Lj3g3v3579350.1

Overview

Field Value
Gene ID Lj3g3v3579350
Transcript ID Lj3g3v3579350.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ubiquitin-conjugating enzyme E2 20-like isoform X2 [Cicer arietinum] gi|502144341|ref|XP_004505662.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24067
10 168 159 2.60E-85 –
PANTHER
PTHR24067:SF121
10 168 159 2.60E-85 –
Gene3D
G3DSA:3.10.110.10
21 170 150 4.50E-62
IPR016135
SUPERFAMILY
SSF54495
28 170 143 1.75E-52
IPR016135
CDD
cd00195
33 170 138 1.14E-62 –
SMART
SM00212
33 175 143 4.90E-59 –
ProSiteProfiles
PS50127
33 165 133 34.992
IPR000608
Pfam
PF00179
34 168 135 6.80E-47
IPR000608
ProSitePatterns
PS00183
103 118 16 –
IPR023313

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj3g3v3579350.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3579350.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.