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Lj0g3v0221649.2

Overview

Field Value
Gene ID Lj0g3v0221649
Transcript ID Lj0g3v0221649.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor DIVARICATA-like isoform X1 [Cicer arietinum] gi|502164758|ref|XP_004513249.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24078
4 148 145 9.60E-78 –
PANTHER
PTHR24078:SF279
4 148 145 9.60E-78 –
ProSiteProfiles
PS51293
8 63 56 9.704
IPR017884
SMART
SM00717
9 61 53 1.80E-10
IPR001005
SUPERFAMILY
SSF46689
11 67 57 4.59E-12
IPR009057
CDD
cd00167
12 59 48 3.41E-09 –
Pfam
PF00249
12 56 45 1.70E-09
IPR001005
Gene3D
G3DSA:1.10.10.60
12 56 45 5.60E-06
IPR009057
MobiDBLite
mobidb-lite
70 121 52 – –
ProSiteProfiles
PS51294
115 149 35 12.693
IPR017930
SUPERFAMILY
SSF46689
118 148 31 5.17E-06
IPR009057
Gene3D
G3DSA:1.10.10.60
123 149 27 1.10E-06
IPR009057
Pfam
PF00249
123 148 26 3.80E-06
IPR001005
CDD
cd00167
123 149 27 5.27E-06 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 22

Expression data

Expression pattern

Expression pattern of Lj0g3v0221649.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0221649.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.