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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR43859
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.018s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0102500.1
n.a. Acetyl-coenzyme A synthetase; TAIR: AT5G16370.1 acyl activating enzyme 5; Swiss-Prot: sp|Q9FFE6|AAE5_ARATH Probable acyl-activating enzyme 5, peroxisomal; TrEMBL-Plants: tr|I1JHQ7|I1JHQ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0102500 LjG1.1_chr1 15753342 15756949 +
1 domain prediction
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LotjaGi1g1v0102500.2
n.a. Acetyl-coenzyme A synthetase; TAIR: AT5G16370.1 acyl activating enzyme 5; Swiss-Prot: sp|Q9FFE6|AAE5_ARATH Probable acyl-activating enzyme 5, peroxisomal; TrEMBL-Plants: tr|I1JHQ7|I1JHQ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0102500 LjG1.1_chr1 15753848 15755491 +
1 domain prediction
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LotjaGi1g1v0102700.1
n.a. Acetyl-coenzyme A synthetase; TAIR: AT5G16340.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|Q9FFE9|AAE6_ARATH Probable acyl-activating enzyme 6; TrEMBL-Plants: tr|I1JHQ5|I1JHQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0102700 LjG1.1_chr1 15779153 15781260 +
1 domain prediction
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LotjaGi2g1v0444300.1
n.a. CoA ligase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A1J7FX14|A0A1J7FX14_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0444300 LjG1.1_chr2 93970638 93971925 +
1 domain prediction
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LotjaGi2g1v0444500.1
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A151SCZ9|A0A151SCZ9_CAJCA Medium-chain-fatty-acid--CoA ligase; Found in the gene: LotjaGi2g1v0444500 LjG1.1_chr2 93998473 94008913 +
1 domain prediction
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LotjaGi2g1v0444500.2
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A151SCZ9|A0A151SCZ9_CAJCA Medium-chain-fatty-acid--CoA ligase; Found in the gene: LotjaGi2g1v0444500 LjG1.1_chr2 93998478 94009047 +
1 domain prediction
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LotjaGi2g1v0444500.3
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A151SCZ9|A0A151SCZ9_CAJCA Medium-chain-fatty-acid--CoA ligase; Found in the gene: LotjaGi2g1v0444500 LjG1.1_chr2 93998524 94006515 +
1 domain prediction
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LotjaGi2g1v0444500.4
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A151SCZ9|A0A151SCZ9_CAJCA Medium-chain-fatty-acid--CoA ligase; Found in the gene: LotjaGi2g1v0444500 LjG1.1_chr2 93998533 94001856 +
1 domain prediction
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LotjaGi2g1v0444500.5
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A151SCZ9|A0A151SCZ9_CAJCA Medium-chain-fatty-acid--CoA ligase; Found in the gene: LotjaGi2g1v0444500 LjG1.1_chr2 93998580 94000968 +
1 domain prediction
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LotjaGi2g1v0444500.6
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A1J7FX14|A0A1J7FX14_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0444500 LjG1.1_chr2 93998773 94000968 +
1 domain prediction
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LotjaGi2g1v0444500.7
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A151SCZ9|A0A151SCZ9_CAJCA Medium-chain-fatty-acid--CoA ligase; Found in the gene: LotjaGi2g1v0444500 LjG1.1_chr2 94003539 94009047 +
1 domain prediction
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LotjaGi2g1v0444500.8
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A151SCZ9|A0A151SCZ9_CAJCA Medium-chain-fatty-acid--CoA ligase; Found in the gene: LotjaGi2g1v0444500 LjG1.1_chr2 94003772 94008913 +
1 domain prediction
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LotjaGi4g1v0137300.1
n.a. Acetyl-coenzyme A synthetase; TAIR: AT2G17650.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|Q9SEY5|AAE2_ARATH Probable acyl-activating enzyme 2; TrEMBL-Plants: tr|I1JCB2|I1JCB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0137300 LjG1.1_chr4 20180548 20188869 +
1 domain prediction
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LotjaGi4g1v0137300.2
n.a. Acetyl-coenzyme A synthetase; TAIR: AT2G17650.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|Q9SEY5|AAE2_ARATH Probable acyl-activating enzyme 2; TrEMBL-Plants: tr|I1JCB2|I1JCB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0137300 LjG1.1_chr4 20180565 20193109 +
1 domain prediction
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LotjaGi4g1v0335600.1
n.a. CoA ligase; TAIR: AT3G16910.1 acyl-activating enzyme 7; Swiss-Prot: sp|Q8VZF1|AEE7_ARATH Acetate/butyrate--CoA ligase AAE7, peroxisomal; TrEMBL-Plants: tr|G7JMS0|G7JMS0_MEDTR Acetate/butyrate-CoA ligase AAE7, peroxisomal protein; Found in the gene: LotjaGi4g1v0335600 LjG1.1_chr4 71580664 71588553 +
1 domain prediction
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LotjaGi4g1v0335600.2
n.a. CoA ligase; TAIR: AT3G16910.1 acyl-activating enzyme 7; Swiss-Prot: sp|Q8VZF1|AEE7_ARATH Acetate/butyrate--CoA ligase AAE7, peroxisomal; TrEMBL-Plants: tr|G7JMS0|G7JMS0_MEDTR Acetate/butyrate-CoA ligase AAE7, peroxisomal protein; Found in the gene: LotjaGi4g1v0335600 LjG1.1_chr4 71582650 71586406 +
1 domain prediction
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LotjaGi6g1v0051100.1
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G66120.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|Q9C8D4|AAE11_ARATH Butyrate--CoA ligase AAE11, peroxisomal; TrEMBL-Plants: tr|A0A1J7HNA6|A0A1J7HNA6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051100 LjG1.1_chr6 9168986 9171700 +
1 domain prediction
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LotjaGi6g1v0051200.1
n.a. Acetyl-coenzyme A synthetase; TAIR: AT1G66120.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|Q9C8D4|AAE11_ARATH Butyrate--CoA ligase AAE11, peroxisomal; TrEMBL-Plants: tr|A0A1J7HNA6|A0A1J7HNA6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051200 LjG1.1_chr6 9183926 9186870 -
1 domain prediction
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LotjaGi6g1v0256400.1
n.a. CoA ligase; TAIR: AT3G16910.1 acyl-activating enzyme 7; Swiss-Prot: sp|Q8VZF1|AEE7_ARATH Acetate/butyrate--CoA ligase AAE7, peroxisomal; TrEMBL-Plants: tr|A0A0K0M949|A0A0K0M949_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256400 LjG1.1_chr6 56932501 56936265 -
1 domain prediction
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