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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0335600 |
Transcript ID | LotjaGi4g1v0335600.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | CoA ligase; TAIR: AT3G16910.1 acyl-activating enzyme 7; Swiss-Prot: sp|Q8VZF1|AEE7_ARATH Acetate/butyrate--CoA ligase AAE7, peroxisomal; TrEMBL-Plants: tr|G7JMS0|G7JMS0_MEDTR Acetate/butyrate-CoA ligase AAE7, peroxisomal protein; Found in the gene: LotjaGi4g1v0335600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:71582650..71586406) extracted from Lotus japonicus Gifu genome v1.2.
ACTGGTTGCAGATCGATGGCGAAGGACATAGACGAGTTGCCGAAGAACGCAGCGAACTACACGGCGTTGACGCCGCTCTG GTTCTTAGAGAGAGCAGCTCAGGTGCATCCCAACAGAAAATCGCTCATCCATGGATCCCGTCACTACACGTGGCACCAGA CTTACCAGCGTTGCCGTCGATTCGCCTCCGCTCTTTCCAACCACTCCATTGGCCTCGGAAACACCGTACTTCTCTCTCCC TTTCTCTGTTTTTTTATTACTCTGGTTTGCAAGATTGCTCGGATCCATGTTTGAAAATCTTTCTATAATTGCTTCAAAAT AATATTTAATTATCGGAAGAAGTTGTGTGAGAGTAGCTTCTAACTAGCAGAATTGATTCTAGATGGAAATTGTTATTTGT TTTCTCTAAATCTCTTTTTGTCTGGATACATTTGCTTTACCATCATCCATGGCCATACAATACTATTTTGTTCGTGTTCA CGTGTCCAATAGCCTTTTACTTTTTTTTTGTTTGGCTGTAAAGGTCTAACACAACCCTCCTCCTATGTCCGGGCTTGGGC TACGCAAGCATAGGTAGAGTCAATAATAGTATCGCTCATAATTTATTTTTTAATCGAGCTCAATGACGTAGTGTGATCAA TATAATCGATCTTACTTGGTGGGATAAGACCTTTGTTCTTCTTGTTGTTTTTTTTAACATTATTTCATGGTAAAGGACGA AAGTGGTAGGAAAATTAGTTTTGTCTGATTGCAAATTTGCAATTGAGGTAGGATGATGACACTTTTCAGGAAAATATACT TTCATATTGTAGTCACTTAGAAATACTAGAAAAGAGAATTTTCTGATGAAAATAAAAAAGAGAAATGAGATATATAATCA GTGATTTGATAATAAAAGATATATACATATAGCAGGAAAAGAAAAGGTGGAAATGCAATGGAAGAAAAAATGAGTGTGAA TGTATGTATAAGTATATTATTTTTAAAGGTATTTTTTCTTACAAAATAATATTTTTGTCACTTTTTTTTGAAAAAATTCA AGTATAGTAAAATAAAATAATAGTTATAAAATTAAAATTATCAGGAATTATTAGTCTCTATTTATAATTTAGTTATTAAA ATTAAAATTACGGGAGCCAACTTGGTTCAAGTGGTACATGGGTTCAAATATTGTATATAGAAAATACTTATTTGGCGGTT CCCCGGGATTGCTTCATATGGAGGGAATTTGTGTTAGACCCAAAAAAAGAGATTAAAATTATGTGAAGAATTAACTTTCT GAAAATATATAACTCGGATCGCTCAACATATTGAAAACCGTTAAGATTTTGATTGAGCATATAACAAATCAATAGATTTA ACCTTTACTAGAGTAGCAAAATTTTTCAAACTATAAGGGCATGAATATTGTTTTATGTTGTATGGACTAGGGAGCATGTT TTGTTCACACTTGAGGCTTGCTTCACACTGGTTATATAGTCCTCTTAGTTTGTTTTGGTTTTAGGCCAAGTTCTAAAATT AAAATGTCAATAATTTTCTCTATGCCATTGCTAACAGGTAGCTGTTATTGCACCCAACATTCCAGCACTTTATGAAGCTC ATTTTGGGGTTCCAATGGCAGGGGCTGTATTGAACCCTGTTAACATCAGGCTCAATGCATCCACAATAGCTTTCCTTCTT GGTCATTGCACAGCAGCAGTAGTGATCGTAGACCAAGAGTTCTTTTCATTGGCAGAAGAAGCCATGAAAATATGGTCTGA GAAAGCCAAAACCTTCAAGCCTCCAATTCTAATTGTTATTGGTGATGAAAACTGCGACCCTAAGGCACTTCAATATGCTT TGGACAAAGGAGTCATTGAATATGAGGACTTTCTTCAAAGTGGTGACCCTGAATATGCATGGAAACCTCCAGAAGATGAG TGGCAGAGCATTGCTTTGGGTTACACGTCAGGTACTGTTATGAACCAATTTTCCCAAAAGTTTAAGCTGTTAGGTGAAGA CACATGAATGAATTTATATTACATTTCTAACAGGTACCACTGCTAGTCCCAAGGGTGTGGTGTTGCATCACAGGGGAGCT TATTTGATGTCTTTGTGTGGAGCTCTTGTTTGGGGAATGACTGAAGGAGCTGTATATCTTTGGACACTACCCATGTTTCA TTGCAATGGGTGGTGCTACACTTGGACACTTCCAGCCATCTATGGCACTAACATTTGCCTTCGCCAGGTGAACTAATGCT TGATGCTTGATGGGTTTGGTTTCCCCCTGTATTTATTTGAGTTACTGAAACAAATTGTGACTAACTTGTTATCCTTTTTG TATTGAGTAATTTGTAGTGTTCTTGCATGCATTGTTCATATGAATTTGACTCCTCTAAGGTGAGAGAGTCACTTTAGAGT GTAAAGTAAACTACCACAACCATGGATTGAGAAATCAATGGCTGAAATTTAAAGAATATCATAATTTGTTATACTGGTGC AAGCATATAATCTTAATCACAACCATCGATTTCTCAATCAACTGTTAGGATAACTTTACATTCTAAAGTGATTCGCTCAC TTTAGTGGTGTCAAATCCTGTTGACATGTTGTAATTCTACCTTCAGTTTTGGTGTGCAATCATTGATGCTAATGCAATTT GATGTATGCCTCCTTGAGCACATGGTTGATGATAGACTGATAGTTTTAGATGATTGTGGCATGATCATTTCTATATAGTA GTCTTCAGGTAGTTTCTTGGTTGATAGCATGCTACTTTAAAGTCTAAACTCTTTTCAGAGTTGTTTTCTTTAAATGCTAG TTAGTTGATTGTCAAATAGATATCTACCCTCAAATCACTTTTTCTTGATGTGTTATGTAGGTAACAGCGAAGGCGGTGTA TGAAGCCATTGCAAAATACAAAGTGACTCATTTTTGTGCAGCACCTGTGGTTCTTAACTCAATAATTAATGCCCCACCTG AGGATACCATTCTTCCTCTACCCCATGTGGTACATGTGATTACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTTCTGGC ATGTCGCAACGAGGATTTCGCGTCACGCACACTTACGGTCTCTCAGAAACTTATGGCCCTTCAGTCTATTGCGCCTGGAA ACCCGAGTGGGACTCGCTTCCCCTTGAAACTCAAGCCCGGCTCCACGCAAGGCAAGGGGTTCGGTACATTGTCTTGGAAG GCCTTGACGTTGTGAACACAAAAACCATTAAACCTGTTCCTGCTGATGGTAAAACTGTTGGTGAGATTGTGATGCGGGGT AATGCTGTGATGAAAGGATACCTAAAGAACCCGGAAGCTAATGAAGAGACCTTTGCAAATGGATGGTTTCACTCCGGGGA TCTTGCTGTGAAGCATCCAGATGGATATATAGAAATCAAAGACAGATCAAAGGACATCATAATCTCAGGTGCCGAAAACA TCAGCAGTGTGGAGATAGAGAATACTCTGTACTCACATCCTGCGATACTGGAGACATCAGTGGTTGCAAGGCCAGATGAG AGATGGGGTGAGTCTCCCTGTGCTTTTGTGACATTAAAACCAGGAGTGGATGCTAGTAATGAGCAGCGTCTAGTTGAGGA TATACTCAAGTTTTGCAGGGCCAAGATGCCAGCTTATTGGGTCCCAAAATCAGTAGTATTTGGACTGTTACCTAAGACCG CTACAGGGAAGGTGCAGAAGCATTTGCTGAGGGCCAAGGCAAAAGAGATGGGACCTGTTAGGACGAGCAAGTTGTGA
CDS sequence (LotjaGi4g1v0335600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAGGACATAGACGAGTTGCCGAAGAACGCAGCGAACTACACGGCGTTGACGCCGCTCTGGTTCTTAGAGAGAGC AGCTCAGGTGCATCCCAACAGAAAATCGCTCATCCATGGATCCCGTCACTACACGTGGCACCAGACTTACCAGCGTTGCC GTCGATTCGCCTCCGCTCTTTCCAACCACTCCATTGGCCTCGGAAACACCGTAGCTGTTATTGCACCCAACATTCCAGCA CTTTATGAAGCTCATTTTGGGGTTCCAATGGCAGGGGCTGTATTGAACCCTGTTAACATCAGGCTCAATGCATCCACAAT AGCTTTCCTTCTTGGTCATTGCACAGCAGCAGTAGTGATCGTAGACCAAGAGTTCTTTTCATTGGCAGAAGAAGCCATGA AAATATGGTCTGAGAAAGCCAAAACCTTCAAGCCTCCAATTCTAATTGTTATTGGTGATGAAAACTGCGACCCTAAGGCA CTTCAATATGCTTTGGACAAAGGAGTCATTGAATATGAGGACTTTCTTCAAAGTGGTGACCCTGAATATGCATGGAAACC TCCAGAAGATGAGTGGCAGAGCATTGCTTTGGGTTACACGTCAGGTACCACTGCTAGTCCCAAGGGTGTGGTGTTGCATC ACAGGGGAGCTTATTTGATGTCTTTGTGTGGAGCTCTTGTTTGGGGAATGACTGAAGGAGCTGTATATCTTTGGACACTA CCCATGTTTCATTGCAATGGGTGGTGCTACACTTGGACACTTCCAGCCATCTATGGCACTAACATTTGCCTTCGCCAGGT AACAGCGAAGGCGGTGTATGAAGCCATTGCAAAATACAAAGTGACTCATTTTTGTGCAGCACCTGTGGTTCTTAACTCAA TAATTAATGCCCCACCTGAGGATACCATTCTTCCTCTACCCCATGTGGTACATGTGATTACAGCTGGGGCTGCTCCTCCT CCTTCTGTTCTTTCTGGCATGTCGCAACGAGGATTTCGCGTCACGCACACTTACGGTCTCTCAGAAACTTATGGCCCTTC AGTCTATTGCGCCTGGAAACCCGAGTGGGACTCGCTTCCCCTTGAAACTCAAGCCCGGCTCCACGCAAGGCAAGGGGTTC GGTACATTGTCTTGGAAGGCCTTGACGTTGTGAACACAAAAACCATTAAACCTGTTCCTGCTGATGGTAAAACTGTTGGT GAGATTGTGATGCGGGGTAATGCTGTGATGAAAGGATACCTAAAGAACCCGGAAGCTAATGAAGAGACCTTTGCAAATGG ATGGTTTCACTCCGGGGATCTTGCTGTGAAGCATCCAGATGGATATATAGAAATCAAAGACAGATCAAAGGACATCATAA TCTCAGGTGCCGAAAACATCAGCAGTGTGGAGATAGAGAATACTCTGTACTCACATCCTGCGATACTGGAGACATCAGTG GTTGCAAGGCCAGATGAGAGATGGGGTGAGTCTCCCTGTGCTTTTGTGACATTAAAACCAGGAGTGGATGCTAGTAATGA GCAGCGTCTAGTTGAGGATATACTCAAGTTTTGCAGGGCCAAGATGCCAGCTTATTGGGTCCCAAAATCAGTAGTATTTG GACTGTTACCTAAGACCGCTACAGGGAAGGTGCAGAAGCATTTGCTGAGGGCCAAGGCAAAAGAGATGGGACCTGTTAGG ACGAGCAAGTTGTGA
Protein sequence (LotjaGi4g1v0335600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKDIDELPKNAANYTALTPLWFLERAAQVHPNRKSLIHGSRHYTWHQTYQRCRRFASALSNHSIGLGNTVAVIAPNIPA LYEAHFGVPMAGAVLNPVNIRLNASTIAFLLGHCTAAVVIVDQEFFSLAEEAMKIWSEKAKTFKPPILIVIGDENCDPKA LQYALDKGVIEYEDFLQSGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLCGALVWGMTEGAVYLWTL PMFHCNGWCYTWTLPAIYGTNICLRQVTAKAVYEAIAKYKVTHFCAAPVVLNSIINAPPEDTILPLPHVVHVITAGAAPP PSVLSGMSQRGFRVTHTYGLSETYGPSVYCAWKPEWDSLPLETQARLHARQGVRYIVLEGLDVVNTKTIKPVPADGKTVG EIVMRGNAVMKGYLKNPEANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPAILETSV VARPDERWGESPCAFVTLKPGVDASNEQRLVEDILKFCRAKMPAYWVPKSVVFGLLPKTATGKVQKHLLRAKAKEMGPVR TSKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 3 | 564 | 562 | 0.0 | – | |
PANTHER | 3 | 564 | 562 | 0.0 | – | |
Gene3D | 3 | 450 | 448 | 5.4E-99 | ||
SUPERFAMILY | 12 | 555 | 544 | 1.57E-129 | – | |
CDD | 15 | 551 | 537 | 0.0 | – | |
Pfam | 24 | 455 | 432 | 1.2E-87 | ||
Gene3D | 451 | 558 | 108 | 6.4E-30 | – | |
Pfam | 464 | 543 | 80 | 5.9E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi4g1v0335600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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