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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0051200 |
| Transcript ID | LotjaGi6g1v0051200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acetyl-coenzyme A synthetase; TAIR: AT1G66120.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|Q9C8D4|AAE11_ARATH Butyrate--CoA ligase AAE11, peroxisomal; TrEMBL-Plants: tr|A0A1J7HNA6|A0A1J7HNA6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:9183926..9186870) extracted from Lotus japonicus Gifu genome v1.2.
CTCATATATAATTAGGGAAAGCAACGTGCACAATGCACATTACATGGATGATGGACCCAAAAGAAAAAAATAATTAAGGT CAATTGTCAACTGTTCAGACTTCAAACTCAACAAACAACATCCCAAAATATAAAACTCAACAAACAACTTTCTATAAATT ACGACTTCCACACCTAAACTTCATAGCATCTTCTAAGCTACTAACTGGGCCCCACACACTTGGTAAATAACGTGGCCTTT AACAAATCTGTGCTTTAACTTCATTAATAGTTTTTCCTATAAAAAGACCCCATGTGAGTGCTCACTCTCACACTCAACCA TAACAACTTTGTTTTTGTTTCTATTCACCTCTCTTGCTCTCTTTGCAAATCATCAATATTCTCCACTTTCTTCCAACTTT GGTATAGCCTGCAGAAATGGATAGCCTTCCAAAATTCCCAGCAAATCACACACCACTCACCCCTTTAACATTTTTGAAGA GAGCAGCTGCCAGCTATCCAAACCGTGTCTCAGTGATCCATGAAGGAATCCGTTTCACTTGGTCTCAAACTTATGAACGT TGCCGCAGACTTGCTTTCACCCTCCGTTCTCTCAATATTGCAAAGAATGATGTTGTAAGTATTAACAATTTTCTGATCAT ACATATACCATATCAACTTTTGTGAATATTTAAGTTGCTACAAATTTCAAATCCATGAATATGTTACATGATCGACATCA TATAGGACAAAAATTAATTGTTTTCTGCTCAACAATGAATCAGGTATCAGTGCTGGCTCCTAACATCCCAGCAATGTATG AGATGCATTTTGCGGTTCCTATGGCGGGTGCTGTGCTGAACACCATCAACTCGCGTTTGGATGCAAAGAACATAGCCACT ATTCTAAGTCACTCTGAAGCCAAAATCTTCTTTGTAGACTATGAATACGTCAACAAGGCGCGAGAAGCCCTCAGAATGCT CGTGGTTCAAAAGGGTGTCAAACCAAATTCAACCGAACAGGACTATTCAACTCTTCCACTTGTCATTGTCATAGATGACA TCAACTCTCCCACCGGCGTCCGGCTAGGTGAGCTGGAATATGAGCAGATGGTTCACCGCGGGAACCCAAATTATGTTCCC GAGGAAATCCAAGAAGAATGGTCTCCCATTGCTTTGAATTATACCTCAGGAACAACATCAGAACCCAAAGGTGTTGTCTA TAGTCATAGAGGAGCATATCTAAGTACTCTGAGCCTCGTACTTGGATGGGAAATGGGTAGTGAACCGGTCTACCTTTGGA CGCTGCCAATGTTCCATTGCAATGGGTGGACTTTCCCATGGGGTGTGGCCGCGCGAGGCGGTACTAATGTGTGCATTCGC AATTGCGCAGCGAGTGACATTTACAGGAGCATTTCCCTGCATAATGTCACCCACATGTGCTGCGCGCCAATCGTGTTCAA CATCATCTTAGGCGCCAAACCGAGCGAGCGCAAAGTGATCAGAAACCGGGTGAACATACTCACAGGAGGAGCCCCGCCGC CTGCGTCACTGCTCGAGCAAATTGAGCCCCTCGGGTTTCACGTGACGCACGCGTATGGGCTCACTGAGGCGACTGGGCCT GCCCTTGTGTGCGAGTGGCAGCAGCAATGGAACCGTCTTCCGAAGCAAGAGCAGGCTCAGCTGAAAGCACGTCAAGGGGT GAGTGTGCTGACACTTGAAGATGTTGATGTGAAGAACCTTGACACCATGGAGAGCGTGCCGCGAGATGGGAAATCAATGG GGGAGATTGTGTTGAAAGGAAGTGGGATCATGATGGGTTACTTCAAAGACAAGAAAGCAACTTCAGAAGCCTTTAACAAT GGTTGGTTTCGAACCGGGGATGTTGGGGTGATACATCCAGATGGGTATTTGGAAATCAAGGATAGATCCAAAGATGTGAT TATATCAGGAGGGGAAAACATAAGCAGTGTGGAAGTGGAGTCTGTTCTGTATCGCCATCCGAGGGTGTTGGAGGCGGCGG TGGTGGCGGTGCCGCATCCTAAATGGGGGGAGAGTCCTTGTGCCTTTGTGTCATTGAAGAAGGATTCATCAAATGATCAT GTGACTGAGGGGGATATAATTGGGTTTTGCAGGAAGAACATGCCACACTTCATGGTTCCAAAGATGGTGAAGTTTATGGA GGAGCTGCCAAAGACTTCAACTGGTAAGATTCAGAAGTTTGAATTGAGAGTTAAGGCTAAGTGCTTTGAGGTCTCAGAGA ATCTGCAATCCAAGAACGACAACAAGTCTAGCCAAGTCAATCAAAATAATCAGCACATTTTAGCTGTGTCTCGTCTTTGA ATGTACGTGTTGAGTTTCTTTCTTAATTTTCTAATGTAAAATAATGCAATAGTACTGTGTACATATCGAGTGAGAGCTAT TTGCTATTTTGCTGCTTATATTCTTGGGGATTTCTAACTTCTGTACTATTTAGGCTAAGCTAAAGTTACAAGTTTGTGTT GTCTCAGCTTGTTTTGCGGCAGATCAGAGCCAAAATATAAATAATTTTTTCCACCATCTTCTTGCTTCTCCATTTTTACC CCTTTTTTCTAGATCATTCCTGCCAACTTTTTTTATGAGAAACAACAATCGGTAAGAACAAATTATTTCCTCTTAGAAAA TAATGCATTTGATTTTCATTGCCAACATAAAGATGTTGTTGGTAAGTGATAAGTAACCTTTCTTTGATCCTAAACGCATG TCCTTACCCATTTTGATGATCGGAGTCAAACGTACCCAAACTATTTTATTATGTTCCAGTTAGCTAGTGCTCTGCATTAT GTTTTTCTATTTTTTAGTTAGTTGAATCGTTAAGCTATTGCTTTTTTAAGTCCCATTTTACCTTCACTTATTACCATTTT TTAATTAGATTTAATTTGTATGCACTAACCGTGTTAAGAGTTGTACACATCCATTCAATTACATC
CDS sequence (LotjaGi6g1v0051200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAGCCTTCCAAAATTCCCAGCAAATCACACACCACTCACCCCTTTAACATTTTTGAAGAGAGCAGCTGCCAGCTA TCCAAACCGTGTCTCAGTGATCCATGAAGGAATCCGTTTCACTTGGTCTCAAACTTATGAACGTTGCCGCAGACTTGCTT TCACCCTCCGTTCTCTCAATATTGCAAAGAATGATGTTGTATCAGTGCTGGCTCCTAACATCCCAGCAATGTATGAGATG CATTTTGCGGTTCCTATGGCGGGTGCTGTGCTGAACACCATCAACTCGCGTTTGGATGCAAAGAACATAGCCACTATTCT AAGTCACTCTGAAGCCAAAATCTTCTTTGTAGACTATGAATACGTCAACAAGGCGCGAGAAGCCCTCAGAATGCTCGTGG TTCAAAAGGGTGTCAAACCAAATTCAACCGAACAGGACTATTCAACTCTTCCACTTGTCATTGTCATAGATGACATCAAC TCTCCCACCGGCGTCCGGCTAGGTGAGCTGGAATATGAGCAGATGGTTCACCGCGGGAACCCAAATTATGTTCCCGAGGA AATCCAAGAAGAATGGTCTCCCATTGCTTTGAATTATACCTCAGGAACAACATCAGAACCCAAAGGTGTTGTCTATAGTC ATAGAGGAGCATATCTAAGTACTCTGAGCCTCGTACTTGGATGGGAAATGGGTAGTGAACCGGTCTACCTTTGGACGCTG CCAATGTTCCATTGCAATGGGTGGACTTTCCCATGGGGTGTGGCCGCGCGAGGCGGTACTAATGTGTGCATTCGCAATTG CGCAGCGAGTGACATTTACAGGAGCATTTCCCTGCATAATGTCACCCACATGTGCTGCGCGCCAATCGTGTTCAACATCA TCTTAGGCGCCAAACCGAGCGAGCGCAAAGTGATCAGAAACCGGGTGAACATACTCACAGGAGGAGCCCCGCCGCCTGCG TCACTGCTCGAGCAAATTGAGCCCCTCGGGTTTCACGTGACGCACGCGTATGGGCTCACTGAGGCGACTGGGCCTGCCCT TGTGTGCGAGTGGCAGCAGCAATGGAACCGTCTTCCGAAGCAAGAGCAGGCTCAGCTGAAAGCACGTCAAGGGGTGAGTG TGCTGACACTTGAAGATGTTGATGTGAAGAACCTTGACACCATGGAGAGCGTGCCGCGAGATGGGAAATCAATGGGGGAG ATTGTGTTGAAAGGAAGTGGGATCATGATGGGTTACTTCAAAGACAAGAAAGCAACTTCAGAAGCCTTTAACAATGGTTG GTTTCGAACCGGGGATGTTGGGGTGATACATCCAGATGGGTATTTGGAAATCAAGGATAGATCCAAAGATGTGATTATAT CAGGAGGGGAAAACATAAGCAGTGTGGAAGTGGAGTCTGTTCTGTATCGCCATCCGAGGGTGTTGGAGGCGGCGGTGGTG GCGGTGCCGCATCCTAAATGGGGGGAGAGTCCTTGTGCCTTTGTGTCATTGAAGAAGGATTCATCAAATGATCATGTGAC TGAGGGGGATATAATTGGGTTTTGCAGGAAGAACATGCCACACTTCATGGTTCCAAAGATGGTGAAGTTTATGGAGGAGC TGCCAAAGACTTCAACTGGTAAGATTCAGAAGTTTGAATTGAGAGTTAAGGCTAAGTGCTTTGAGGTCTCAGAGAATCTG CAATCCAAGAACGACAACAAGTCTAGCCAAGTCAATCAAAATAATCAGCACATTTTAGCTGTGTCTCGTCTTTGA
Protein sequence (LotjaGi6g1v0051200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSLPKFPANHTPLTPLTFLKRAAASYPNRVSVIHEGIRFTWSQTYERCRRLAFTLRSLNIAKNDVVSVLAPNIPAMYEM HFAVPMAGAVLNTINSRLDAKNIATILSHSEAKIFFVDYEYVNKAREALRMLVVQKGVKPNSTEQDYSTLPLVIVIDDIN SPTGVRLGELEYEQMVHRGNPNYVPEEIQEEWSPIALNYTSGTTSEPKGVVYSHRGAYLSTLSLVLGWEMGSEPVYLWTL PMFHCNGWTFPWGVAARGGTNVCIRNCAASDIYRSISLHNVTHMCCAPIVFNIILGAKPSERKVIRNRVNILTGGAPPPA SLLEQIEPLGFHVTHAYGLTEATGPALVCEWQQQWNRLPKQEQAQLKARQGVSVLTLEDVDVKNLDTMESVPRDGKSMGE IVLKGSGIMMGYFKDKKATSEAFNNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVEVESVLYRHPRVLEAAVV AVPHPKWGESPCAFVSLKKDSSNDHVTEGDIIGFCRKNMPHFMVPKMVKFMEELPKTSTGKIQKFELRVKAKCFEVSENL QSKNDNKSSQVNQNNQHILAVSRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 577 | 577 | 0.0 | – | |
| PANTHER | 1 | 577 | 577 | 0.0 | – | |
| Gene3D | 3 | 449 | 447 | 1.6E-97 | ||
| SUPERFAMILY | 6 | 551 | 546 | 4.97E-135 | – | |
| CDD | 11 | 548 | 538 | 0.0 | – | |
| Pfam | 21 | 454 | 434 | 1.2E-92 | ||
| ProSitePatterns | 197 | 208 | 12 | - | ||
| Gene3D | 450 | 555 | 106 | 4.3E-35 | – | |
| Pfam | 463 | 541 | 79 | 2.0E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi6g1v0051200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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