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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0051100 |
| Transcript ID | LotjaGi6g1v0051100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acetyl-coenzyme A synthetase; TAIR: AT1G66120.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|Q9C8D4|AAE11_ARATH Butyrate--CoA ligase AAE11, peroxisomal; TrEMBL-Plants: tr|A0A1J7HNA6|A0A1J7HNA6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:9168986..9171700) extracted from Lotus japonicus Gifu genome v1.2.
TGAGTGTTCACTCTCACTCACAACCATAACAACTCTGCTTCTGTTTTATTCTCCTCTCTTCCTCTCTTTGCAAATCATCA AGATTCTCTAGTTTCTTCCCAATTTAGCAGAGCCTGTAATGGATAACCTTCCAAAATACGAAGCAAATCACACAAAACTC ACCCCTTTAACGTTTTTGAAGAGAGCTGCAGCAAGCTATCCAAACCGTACCTCAGTGATTCATGAAGGAACCTGGTTCAC TTGGTCTCAAACTTATGACCGTTGCCGCAGACTTGCGTTCTCCCTACGTTCTCTCAATATTGCTAGGAATGATGTTGTAA GTGTTAGCAATTTTCTGATCATACCTTATCATTTTTTGAAATTTAAACTGCTACAAATTTCTAAGGGTTCATATATTTAA TGATCCACATGATTTAGGACACAAAATATAATTGAGTGGCATACTAATATTTTGTTTTGTGCTCAATGAATCAGGTATCA GTGTTGGCCCCTAACATCCCAGCCATGTATGAGATGCATTTTGCAGTTCCCATGGCGGGCGCTGTGCTGAACACAATCAA CACTCGTTTGGATGCTAAGAACATCGCCACCATTCTGCGCCACTCGGAAGCCAAAGTCTTCTTTGTGGACTATGAGTATG TGAACAAGGCGCGAGAAGCCCTCAAAATGCTTGTGGTTCAAAAGGGTGCCGAACCAAATCCAAAAGAACAAAACTATTCA ACTCTTCCACTTGTCATTGTCATAGATGACATTAACTCTCCCACAGGTGTCCGACTAGGTGAGCTGGAATATGAGCAGAT GGTTCAACATGGAAATCCAAATTATGTTCCTGAGGAAATTCAAGAAGAATGGTCTCCAATTGCTTTGAATTACACCTCAG GAACAACATCAGAACCCAAAGGTGTTGTCTATAGTCATAGAGGAGCATATCTAAGTACTTTGAGCCTCATACTTGGGTGG GAAATGGGTAGTGAACCGGTATACCTTTGGACGCTGCCAATGTTCCATTGCAATGGGTGGACTTTCACATGGGGTGTGGC CGCACGAGGCGGTACTAATGTGTGCATTCGCAACTGCGCAGCGAGTGACATTTACAGGAGCATTGCCCTGCACAATGTCA CTCACATGTGCTGTGCGCCAATCGTGTTCAACATCATCTTAGGCGCCAAGCCGAGCGAGCGCATAGTGATCAGAAATTCG GTAAACATACTCACTGGAGGAGCGCCACCGCCTGCGTCACTACTCGAGGAAATTGAATCCCTCGGGTTTCATGTGACGCA CGCGTATGGGCTCACTGAGGCGACAGGACCAGCCCTCGTGTGCGAGTGGCAGCAGCAGTGGAACCGTCTTCCGAAGCAAG AACAGGCACAACTTAAAGCGCGTCAAGGGGTGAGTGTGCTGACACTTGCAGATGTTGATGTGAAGAACCTTGACACCATG GAGAGCGTGCCGCGAGATGGGAAATCAATGGGGGAGATTGTGTTGAAAGGAAGTGGGATCATGATGGGTTACTTCAAAGA CAAGAAAGCAACTTCAGAAGCCTTTAACAATGGTTGGTTTCGAACCGGGGATGTTGGGGTGATACATCCAGATGGGTATT TGGAAATCAAGGATAGATCCAAAGATGTGATTATATCAGGAGGGGAAAACATAAGCAGTGTGGAAGTGGAGTCTGTTCTG TACCGCCATCCGAGGGTGTTGGAGGCGGCGGTGGTGGCGGTGCCGCACCCTAAATGGGGGGAGAGTCCTTGTGCCTTTGT GTCATTGAAGAAGGATTCATCAAATGATCATGTGACTGAGGGGGATATAATTGGGTTTTGCAGGAAGAACATGCCACACT TCATGGTTCCAAAGATGGTGAAGTTTTTGGAGGAGCTGCCAAAGACTTCAACTGGTAAGGTTCAGAAGTTTGAATTGAGA GTCCAGGCAAAGTGCTTCGAGGTCTCCGAGAATTTACAATCAAAGAACAACAACAAGTCTAGCCAACTCAATCAAAATAA TCAGCACATTATTATGGCTGTGTCTCGTCTTTGAATGTGCTGAGTATCTATCGACAATTTGAATATATTTATACTCAATT TCTTATCATCAAATTATTCTTTTCTTATGATATTATTTATCATATATCTATGTTCTTTCTCTTGTATGTTTATCCCTCTC TATTGAGTGGAGATGAAATGAGTGTGAACATATATTTTTCCTTCTTAGTTTTGAAATGAAAAAACAGTAGTATGTGAACA TAAAGAGTGATGAGCTACTTGCTGTTTCTGGATATTTTCAACTTCAAGCTAAAGTTATAAGTTTGGACTACTTCAGCTTG TTCTGTGGCAGAGTACCAAAATATTTAAATAATTTTCCACCATGTTGTTTTGTTTCTCCCCTTATTTTGTCATTCCTGCT TGTATCTTAGTTTCTGAGTGGTTCAATGTGTTTTTAGACCAACTAGCATTCCGGTATAAAGAGAAGTAAACTATAATGAT TAATGATTCATTCATATTTCACTTTCTCTTTTATCTCATTTACACTTTTTTTCTATATCTCTCAGCAATTCACATTACAT TCTCTATCATATCATATATTTCTCACTCTTCTCTTCATATCTCACTATTGGTACGTATGAGTGAAAATGTAGTGTGAACA AAGTATTATCAATTGCGATTGGATCTCATGGACTTGTAACTCCTCACACAAAGGCCCTTCTCGACAAGCTCTTGA
CDS sequence (LotjaGi6g1v0051100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAACCTTCCAAAATACGAAGCAAATCACACAAAACTCACCCCTTTAACGTTTTTGAAGAGAGCTGCAGCAAGCTA TCCAAACCGTACCTCAGTGATTCATGAAGGAACCTGGTTCACTTGGTCTCAAACTTATGACCGTTGCCGCAGACTTGCGT TCTCCCTACGTTCTCTCAATATTGCTAGGAATGATGTTGTATCAGTGTTGGCCCCTAACATCCCAGCCATGTATGAGATG CATTTTGCAGTTCCCATGGCGGGCGCTGTGCTGAACACAATCAACACTCGTTTGGATGCTAAGAACATCGCCACCATTCT GCGCCACTCGGAAGCCAAAGTCTTCTTTGTGGACTATGAGTATGTGAACAAGGCGCGAGAAGCCCTCAAAATGCTTGTGG TTCAAAAGGGTGCCGAACCAAATCCAAAAGAACAAAACTATTCAACTCTTCCACTTGTCATTGTCATAGATGACATTAAC TCTCCCACAGGTGTCCGACTAGGTGAGCTGGAATATGAGCAGATGGTTCAACATGGAAATCCAAATTATGTTCCTGAGGA AATTCAAGAAGAATGGTCTCCAATTGCTTTGAATTACACCTCAGGAACAACATCAGAACCCAAAGGTGTTGTCTATAGTC ATAGAGGAGCATATCTAAGTACTTTGAGCCTCATACTTGGGTGGGAAATGGGTAGTGAACCGGTATACCTTTGGACGCTG CCAATGTTCCATTGCAATGGGTGGACTTTCACATGGGGTGTGGCCGCACGAGGCGGTACTAATGTGTGCATTCGCAACTG CGCAGCGAGTGACATTTACAGGAGCATTGCCCTGCACAATGTCACTCACATGTGCTGTGCGCCAATCGTGTTCAACATCA TCTTAGGCGCCAAGCCGAGCGAGCGCATAGTGATCAGAAATTCGGTAAACATACTCACTGGAGGAGCGCCACCGCCTGCG TCACTACTCGAGGAAATTGAATCCCTCGGGTTTCATGTGACGCACGCGTATGGGCTCACTGAGGCGACAGGACCAGCCCT CGTGTGCGAGTGGCAGCAGCAGTGGAACCGTCTTCCGAAGCAAGAACAGGCACAACTTAAAGCGCGTCAAGGGGTGAGTG TGCTGACACTTGCAGATGTTGATGTGAAGAACCTTGACACCATGGAGAGCGTGCCGCGAGATGGGAAATCAATGGGGGAG ATTGTGTTGAAAGGAAGTGGGATCATGATGGGTTACTTCAAAGACAAGAAAGCAACTTCAGAAGCCTTTAACAATGGTTG GTTTCGAACCGGGGATGTTGGGGTGATACATCCAGATGGGTATTTGGAAATCAAGGATAGATCCAAAGATGTGATTATAT CAGGAGGGGAAAACATAAGCAGTGTGGAAGTGGAGTCTGTTCTGTACCGCCATCCGAGGGTGTTGGAGGCGGCGGTGGTG GCGGTGCCGCACCCTAAATGGGGGGAGAGTCCTTGTGCCTTTGTGTCATTGAAGAAGGATTCATCAAATGATCATGTGAC TGAGGGGGATATAATTGGGTTTTGCAGGAAGAACATGCCACACTTCATGGTTCCAAAGATGGTGAAGTTTTTGGAGGAGC TGCCAAAGACTTCAACTGGTAAGGTTCAGAAGTTTGAATTGAGAGTCCAGGCAAAGTGCTTCGAGGTCTCCGAGAATTTA CAATCAAAGAACAACAACAAGTCTAGCCAACTCAATCAAAATAATCAGCACATTATTATGGCTGTGTCTCGTCTTTGA
Protein sequence (LotjaGi6g1v0051100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNLPKYEANHTKLTPLTFLKRAAASYPNRTSVIHEGTWFTWSQTYDRCRRLAFSLRSLNIARNDVVSVLAPNIPAMYEM HFAVPMAGAVLNTINTRLDAKNIATILRHSEAKVFFVDYEYVNKAREALKMLVVQKGAEPNPKEQNYSTLPLVIVIDDIN SPTGVRLGELEYEQMVQHGNPNYVPEEIQEEWSPIALNYTSGTTSEPKGVVYSHRGAYLSTLSLILGWEMGSEPVYLWTL PMFHCNGWTFTWGVAARGGTNVCIRNCAASDIYRSIALHNVTHMCCAPIVFNIILGAKPSERIVIRNSVNILTGGAPPPA SLLEEIESLGFHVTHAYGLTEATGPALVCEWQQQWNRLPKQEQAQLKARQGVSVLTLADVDVKNLDTMESVPRDGKSMGE IVLKGSGIMMGYFKDKKATSEAFNNGWFRTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVEVESVLYRHPRVLEAAVV AVPHPKWGESPCAFVSLKKDSSNDHVTEGDIIGFCRKNMPHFMVPKMVKFLEELPKTSTGKVQKFELRVQAKCFEVSENL QSKNNNKSSQLNQNNQHIIMAVSRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 576 | 576 | 0.0 | – | |
| PANTHER | 1 | 576 | 576 | 0.0 | – | |
| Gene3D | 2 | 449 | 448 | 1.1E-98 | ||
| SUPERFAMILY | 9 | 551 | 543 | 3.14E-136 | – | |
| CDD | 11 | 548 | 538 | 0.0 | – | |
| Pfam | 21 | 454 | 434 | 6.6E-95 | ||
| ProSitePatterns | 197 | 208 | 12 | - | ||
| Gene3D | 450 | 555 | 106 | 5.0E-35 | – | |
| Pfam | 463 | 541 | 79 | 1.2E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi6g1v0051100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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