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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0444500 |
| Transcript ID | LotjaGi2g1v0444500.4 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acetyl-coenzyme A synthetase; TAIR: AT1G20560.1 acyl activating enzyme 1; Swiss-Prot: sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal; TrEMBL-Plants: tr|A0A151SCZ9|A0A151SCZ9_CAJCA Medium-chain-fatty-acid--CoA ligase; Found in the gene: LotjaGi2g1v0444500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93998533..94001856) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATCAAACACTTGGTGGTGGGAAGTAGTGGAAAGTGCGGTGGAGATGGAGGGTGTTATCCGGTACTCCGCCAACTAC GCCGCTCTGACTCCGATCACCTTCTTGGAGCGCTCTGCCATTGTTTACCCAAACTCGCCTTCTGTGGTGTTCGATGACGT CACCTACACTTGGTCTCAGACCCATCAACGCTGCACCAAACTCGCTTCTTCCATTTCTCAGCTCGGTGTTTCACCCGGTG ATGTGGTTCGTTTCAATCATCTTCTCCACTTTCCCAATTTTTTCTGTGATCGATTCTGCTTACACATGAGTAGCTTAGCT GCATTTTTGTACTGTGCATGATTTTGATTGTACTAGGCTCAGGGCTGTTCCTTTTCTCCTATTTGAAGAAACAACATGTA CATGGTGTTAACTGTTATGTTCATGTTAGGTACAGAGGTTTTAACTAATTATGTCTTGGGGTGCTTGGTACACAACTGAA TTATTTATCAAATAAATGCTCATTAACCAACTTATTCAAAGTAAGATCAAAAGTATATGTAGGTGTTAATGCTTATTCAT GAGGTAATCAAAGGAGCTCATTAAAATGAGCTTATATGTTTTTTCGATGAATTAAAATTTCGGGTGAGGGGATGGTGACT CGGTCAGAGGCAGGGAAAACTGTCAGACTCAAAAAAGAGCTTATATGTAGATCATATATAAACTTATCCCAATGTTTACT TAAGTGTTTGTGCTAAAATTAGGCTTTAATAAGATCTTATAAACATCCTTATTGTGGAGTCCACTAATTATCATTGAAAA AGTAGGAAAGACTAGGGAGTAGGGAGAGAAAGTAGAGAGATAGTGACTGTTAAAATTGGAGTATGAACAAATCTGTTGTA TGCCAATATCATTGTAATTTGGCCTGCTAAGCCCGTGTAGTTGATTCCTTCTCCTTATTATGAATTTGCACTCATTTGGA CAGGTTGCTGTATTGGCCCCGAATATTCCAGCGATGTATGAGCTACATTTTGGTGTTCCAATGTCTGGGGCTGTTCTCTG CACGTTAAATACACGCCATGATTCAGCAATGGTTTCGGTGTTATTAAAACATTCTGAGGCTAGGGTCCTTTTTGTAGACT ATCAGTTTCTTGATGTGGCTCAAGGAGCACTTGAAATCCTGTCAAAAGCAAACAACAAGCTTCCCCGTTTGGTCTTAATT TTGGAGTGTGGCCACCCAGCGCCTCACACTGATCATAGTTCTTCCTCTCCTGGAATGTTGATCTATGAGGATGTCATAGC TCAAGGGAATCTTGAATTTGAGGTGAGAAGGCCAAAGGACGAGTGGGATCCAATCTCACTCAATTACACTTCTGGAACTA CATCTAGTCCTAAGGGTGTCATCTACAGCCACAGAGGCGCCTATCTTAATGCCTTGGCTACTGTTCTTCTCAACGAGATG AGGTCTATGCCAGTGTATTTATGGTGCGTTCCCATGTTTCATTGCAATGGATGGTGCCTCCCCTGGGGCATTGCTGCTCA GGGTGGCACTAATATTTGCCAAAGAAGTGTAACTTCTGAAGGGATATTTGACAATATTTTTAAGCACAAGGTAACGCACA TGGCAGGAGCACCTACTGTCTTAAACATGATAATAAATTCACCACCTAAAGTACGGAAGCCACTGCCTGGAAAGGTTGAA GTGATGACAGGTGGTGCTCCACCACCACCTGATGTGTTATTCAGGATGGAAGAACTAGGATTTGTTGTGGCTCATTCATA CGGTTTGACAGAAACTTATGGTCCAGGAACAATTTGCACGTGGAAACCAGAATGGAATAGCCTGCCTCGTGATGAGCAGG CAAAAATCAGGGCCCGTCAAGGAGTGCAGCATCTCGGATTGGAACAACTTGATATAAAAGATCCCCTGACAATGAAGAGT GTACCAGCTGATGCAAAAACCATGGGTGAGGTGATGTTCAGGGGCAACACTGTGATGAATGGATATCTGAAGAATTTGAA AGCAACACAAGATGCATTTAAAGGTGGATGGTTTAGGACTGGTGACTTGGGAGTAAAGCACCCTGATGGTTACATAGAAC TTAAGGACCGCTCAAAGGACATTATCATATCCGGGGGAGAAAATATCAGCTCGATTGAGTTGGAAGGTGTGATTTTTAGT CATCCAGCAGTTCTTGAGGCCGCTGTAGTTGGGAGACCTGATAATTACTGGGGAGAGACACCTTGTGCATTTGTGACACT GAAGGAAGGGTATAGTGCTACAGCAGAGGACATAATACAATTTTGTCACAAGCGTTTGCCTCGCTATATGGCTCCTCGGA CTGTGGTGTTTGCTGATCTGCCAAAGACATCAACTGGCAAGACACAGAAATATGTTCTGAGGGAGAAGGCAAAGGCCATG GGAAGTTTGTCTAAGAAGAACACCAGCCGATTGTAAAGTACAGTATTAAAGGAAAGAAATCGAATACAAGTTTTTAATGT TGCTTTCTTGTTGTAAATTCATTTTCGTATGCTTGTAATATATTTTTCTCTTTGCTGGAATAAAAACTTTCAGCAAATCA ACTGGACATTTGGACTTGATTTTGTTTCCTCCTTTCAGCAAGTCAAATGTGTTAGCTGTCATGATCAAAGGAGGGGAAAA ACCTAATGTGGTTACTTATAGTTCTTTGATGGATGGGTATTGTTTAGTTAATGAAGTAAACAAGGCTGAAGATATATTTA ACACCATGACCCAAATGGAACTGGCTCCTGATGTTCAGAGTTATAGTATCATGATTAACGGATTATGTAAGATTAAAATG GTTGATGATGCCTTGAATCTATTTAAACAAATGCATACTGAGAATATAACTCCTGATGTTGTAACTTACAGTTCTCTTAT AGATGGTTTGTGCAAATCAGGAAGAATCTCTGATGCTTGGGAGCTTGTTGATGAGATGCATTGTAGAGGTCAACCACCTG ATGTGATCACATACAATTCTTTAGTGGATGCTTTATGCAAAAGCCATCATGTTGACAGGGCAATTTCTTTGATCAAGAAA ATCAAAGACCAGGGTATTTATCCAGATGTCTTCACATACAATATACTTATGGATGGACTATGCAAAGGTGGAAGAATTAA GGACGCAATAGAGGTTTTTCAGGATCTTAGTATCAAAGGCTATAGTTTAGATGTTTGTACCTATACAATTATAATTAATG GCCTTTGTAAGGAGGACTTGTTTGATGAACCATTGACATTGATGTCAAAAATGGAAGACGACGGCTGCATCCCTGATCCT ATAACTTACGAAACTATCATTCGTGCTCTCTTTGAAAAAGGTGA
CDS sequence (LotjaGi2g1v0444500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGGTGTTATCCGGTACTCCGCCAACTACGCCGCTCTGACTCCGATCACCTTCTTGGAGCGCTCTGCCATTGTTTA CCCAAACTCGCCTTCTGTGGTGTTCGATGACGTCACCTACACTTGGTCTCAGACCCATCAACGCTGCACCAAACTCGCTT CTTCCATTTCTCAGCTCGGTGTTTCACCCGGTGATGTGGTTGCTGTATTGGCCCCGAATATTCCAGCGATGTATGAGCTA CATTTTGGTGTTCCAATGTCTGGGGCTGTTCTCTGCACGTTAAATACACGCCATGATTCAGCAATGGTTTCGGTGTTATT AAAACATTCTGAGGCTAGGGTCCTTTTTGTAGACTATCAGTTTCTTGATGTGGCTCAAGGAGCACTTGAAATCCTGTCAA AAGCAAACAACAAGCTTCCCCGTTTGGTCTTAATTTTGGAGTGTGGCCACCCAGCGCCTCACACTGATCATAGTTCTTCC TCTCCTGGAATGTTGATCTATGAGGATGTCATAGCTCAAGGGAATCTTGAATTTGAGGTGAGAAGGCCAAAGGACGAGTG GGATCCAATCTCACTCAATTACACTTCTGGAACTACATCTAGTCCTAAGGGTGTCATCTACAGCCACAGAGGCGCCTATC TTAATGCCTTGGCTACTGTTCTTCTCAACGAGATGAGGTCTATGCCAGTGTATTTATGGTGCGTTCCCATGTTTCATTGC AATGGATGGTGCCTCCCCTGGGGCATTGCTGCTCAGGGTGGCACTAATATTTGCCAAAGAAGTGTAACTTCTGAAGGGAT ATTTGACAATATTTTTAAGCACAAGGTAACGCACATGGCAGGAGCACCTACTGTCTTAAACATGATAATAAATTCACCAC CTAAAGTACGGAAGCCACTGCCTGGAAAGGTTGAAGTGATGACAGGTGGTGCTCCACCACCACCTGATGTGTTATTCAGG ATGGAAGAACTAGGATTTGTTGTGGCTCATTCATACGGTTTGACAGAAACTTATGGTCCAGGAACAATTTGCACGTGGAA ACCAGAATGGAATAGCCTGCCTCGTGATGAGCAGGCAAAAATCAGGGCCCGTCAAGGAGTGCAGCATCTCGGATTGGAAC AACTTGATATAAAAGATCCCCTGACAATGAAGAGTGTACCAGCTGATGCAAAAACCATGGGTGAGGTGATGTTCAGGGGC AACACTGTGATGAATGGATATCTGAAGAATTTGAAAGCAACACAAGATGCATTTAAAGGTGGATGGTTTAGGACTGGTGA CTTGGGAGTAAAGCACCCTGATGGTTACATAGAACTTAAGGACCGCTCAAAGGACATTATCATATCCGGGGGAGAAAATA TCAGCTCGATTGAGTTGGAAGGTGTGATTTTTAGTCATCCAGCAGTTCTTGAGGCCGCTGTAGTTGGGAGACCTGATAAT TACTGGGGAGAGACACCTTGTGCATTTGTGACACTGAAGGAAGGGTATAGTGCTACAGCAGAGGACATAATACAATTTTG TCACAAGCGTTTGCCTCGCTATATGGCTCCTCGGACTGTGGTGTTTGCTGATCTGCCAAAGACATCAACTGGCAAGACAC AGAAATATGTTCTGAGGGAGAAGGCAAAGGCCATGGGAAGTTTGTCTAAGAAGAACACCAGCCGATTGTAA
Protein sequence (LotjaGi2g1v0444500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGVIRYSANYAALTPITFLERSAIVYPNSPSVVFDDVTYTWSQTHQRCTKLASSISQLGVSPGDVVAVLAPNIPAMYEL HFGVPMSGAVLCTLNTRHDSAMVSVLLKHSEARVLFVDYQFLDVAQGALEILSKANNKLPRLVLILECGHPAPHTDHSSS SPGMLIYEDVIAQGNLEFEVRRPKDEWDPISLNYTSGTTSSPKGVIYSHRGAYLNALATVLLNEMRSMPVYLWCVPMFHC NGWCLPWGIAAQGGTNICQRSVTSEGIFDNIFKHKVTHMAGAPTVLNMIINSPPKVRKPLPGKVEVMTGGAPPPPDVLFR MEELGFVVAHSYGLTETYGPGTICTWKPEWNSLPRDEQAKIRARQGVQHLGLEQLDIKDPLTMKSVPADAKTMGEVMFRG NTVMNGYLKNLKATQDAFKGGWFRTGDLGVKHPDGYIELKDRSKDIIISGGENISSIELEGVIFSHPAVLEAAVVGRPDN YWGETPCAFVTLKEGYSATAEDIIQFCHKRLPRYMAPRTVVFADLPKTSTGKTQKYVLREKAKAMGSLSKKNTSRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 547 | 547 | 1.6E-292 | – | |
| PANTHER | 1 | 547 | 547 | 1.6E-292 | – | |
| Gene3D | 4 | 444 | 441 | 3.2E-97 | ||
| SUPERFAMILY | 9 | 544 | 536 | 1.2E-133 | – | |
| CDD | 11 | 540 | 530 | 0.0 | – | |
| Pfam | 21 | 449 | 429 | 2.6E-89 | ||
| ProSitePatterns | 192 | 203 | 12 | - | ||
| Gene3D | 445 | 547 | 103 | 3.2E-33 | – | |
| Pfam | 458 | 532 | 75 | 1.6E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi2g1v0444500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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