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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • SM00475
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.016s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v0523550.2
n.a. PREDICTED: DNA polymerase I-like isoform X2 [Cicer arietinum] gi|502142965|ref|XP_004505167.1| chr4 8845803 8850019 +
2 domain predictions
1 GO term
LotjaGi2g1v0098200.1
n.a. 5'-3' exonuclease; TAIR: AT1G34380.2 5'-3' exonuclease family protein; Swiss-Prot: sp|O67550|EX53_AQUAE 5'-3' exonuclease; TrEMBL-Plants: tr|K7MHK5|K7MHK5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0098200 LjG1.1_chr2 32089881 32108363 -
2 domain predictions
1 GO term
LotjaGi4g1v0069300.1
n.a. Flap endonuclease Xni; TAIR: AT3G52050.1 5'-3' exonuclease family protein; Swiss-Prot: sp|O52225|DPO1_THEFI DNA polymerase I, thermostable; TrEMBL-Plants: tr|A0A0S3R340|A0A0S3R340_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0069300 LjG1.1_chr4 8744166 8755534 +
2 domain predictions
1 GO term
LotjaGi5g1v0234800.1
n.a. Flap endonuclease 1; TAIR: AT5G26680.2 5'-3' exonuclease family protein; Swiss-Prot: sp|C6TEX6|FEN1_SOYBN Flap endonuclease 1; TrEMBL-Plants: tr|I3SAA1|I3SAA1_LOTJA Flap endonuclease 1; Found in the gene: LotjaGi5g1v0234800 LjG1.1_chr5 54290965 54296544 +
2 domain predictions
1 GO term
LotjaGi5g1v0234800.2
n.a. Flap endonuclease 1; TAIR: AT5G26680.3 5'-3' exonuclease family protein; Swiss-Prot: sp|C6TEX6|FEN1_SOYBN Flap endonuclease 1; TrEMBL-Plants: tr|A0A072VM97|A0A072VM97_MEDTR Flap endonuclease 1; Found in the gene: LotjaGi5g1v0234800 LjG1.1_chr5 54291033 54296495 +
2 domain predictions
1 GO term