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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • TIGR02397
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.019s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0295860.1
n.a. DNA polymerase III subunit gamma/tau [Medicago truncatula] gi|358348981|ref|XP_003638519.1| chr1 3476038 3481445 -
2 domain predictions
4 GO terms
Lj4g3v0037530.1
n.a. trichome branching-like protein [Gossypium arboreum] gi|395399800|gb|AFN58239.1| chr4 340964 350907 -
2 domain predictions
4 GO terms
Lj4g3v0047620.1
n.a. trichome branching-like protein [Gossypium arboreum] gi|395399800|gb|AFN58239.1| chr4 384932 387073 -
2 domain predictions
4 GO terms
Lj4g3v1389300.1
n.a. DNA polymerase III subunit gamma/tau [Medicago truncatula] gi|357477253|ref|XP_003608912.1| chr4 21682057 21687852 -
2 domain predictions
4 GO terms
LotjaGi1g1v0230800.1
n.a. DNA polymerase III subunit; TAIR: AT4G24790.1 AAA-type ATPase family protein; Swiss-Prot: sp|F4JRP8|STIL2_ARATH Protein STICHEL-like 2; TrEMBL-Plants: tr|A0A151RVR2|A0A151RVR2_CAJCA DNA polymerase III subunit gamma/tau; Found in the gene: LotjaGi1g1v0230800 LjG1.1_chr1 54117667 54122999 +
2 domain predictions
4 GO terms
LotjaGi4g1v0002600.1
n.a. DNA polymerase III subunit; TAIR: AT2G02480.1 AAA-type ATPase family protein; Swiss-Prot: sp|O64728|STI_ARATH Protein STICHEL; TrEMBL-Plants: tr|I1KNQ8|I1KNQ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0002600 LjG1.1_chr4 576670 587323 -
2 domain predictions
4 GO terms
LotjaGi4g1v0225500.1
n.a. Holliday junction ATP-dependent DNA helicase RuvB; TAIR: AT4G24790.1 AAA-type ATPase family protein; Swiss-Prot: sp|F4JRP8|STIL2_ARATH Protein STICHEL-like 2; TrEMBL-Plants: tr|A0A0B2RQ22|A0A0B2RQ22_GLYSO DNA polymerase III subunit gamma/tau; Found in the gene: LotjaGi4g1v0225500 LjG1.1_chr4 53104289 53109938 -
2 domain predictions
4 GO terms
LotjaGi4g1v0225500.2
n.a. Holliday junction ATP-dependent DNA helicase RuvB; TAIR: AT4G24790.1 AAA-type ATPase family protein; Swiss-Prot: sp|F4JRP8|STIL2_ARATH Protein STICHEL-like 2; TrEMBL-Plants: tr|A0A0B2RQ22|A0A0B2RQ22_GLYSO DNA polymerase III subunit gamma/tau; Found in the gene: LotjaGi4g1v0225500 LjG1.1_chr4 53104334 53109688 -
2 domain predictions
4 GO terms
LotjaGi6g1v0319100.1
n.a. DNA polymerase III subunit gamma; TAIR: AT4G18820.1 AAA-type ATPase family protein; Swiss-Prot: sp|F4JRP0|STIL3_ARATH Protein STICHEL-like 3; TrEMBL-Plants: tr|I1M1Q6|I1M1Q6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0319100 LjG1.1_chr6 63605018 63612430 -
2 domain predictions
4 GO terms
LotjaGi6g1v0319100.2
n.a. DNA polymerase III subunit gamma; TAIR: AT4G18820.1 AAA-type ATPase family protein; Swiss-Prot: sp|F4JRP0|STIL3_ARATH Protein STICHEL-like 3; TrEMBL-Plants: tr|I1M1Q6|I1M1Q6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0319100 LjG1.1_chr6 63605214 63612397 -
2 domain predictions
4 GO terms