Domain Predictions — View

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G3DSA:1.20.5.510

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 10

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1788140.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ultraviolet-B-repressible protein [Medicago truncatula] gi\|357465827\|ref\|XP_003603198.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.5.510 IPR009518 NON_CYTOPLASMIC_DOMAIN PF06596 PTHR34455 PTHR34455:SF1 TMhelix TRANSMEMBRANE	9
Lj1g3v3289980.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform 2 [Fragaria vesca subsp]. vesca] gi\|470108279\|ref\|XP_004290449.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:1.20.5.510 G3DSA:3.30.200.20 IPR000719 IPR008271 IPR011009 IPR017441 IPR032872 NON_CYTOPLASMIC_DOMAIN PF00069 PF14380 PS00107 PS00108 PS50011 PTHR27005 PTHR27005:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SSF56112 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix TRANSMEMBRANE mobidb-lite	28
Lj1g3v3289980.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ser/Thr protein kinase [Medicago truncatula] gi\|357508171\|ref\|XP_003624374.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:1.20.5.510 G3DSA:3.30.200.20 IPR000719 IPR001245 IPR011009 IPR017441 IPR032872 NON_CYTOPLASMIC_DOMAIN PF07714 PF14380 PS00107 PS50011 PTHR27005 PTHR27005:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56112 SignalP-TM_EUK TMhelix TRANSMEMBRANE mobidb-lite	25
Ljchlorog3v0010790.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytochrome b6/f complex subunit IV (chloroplast) [Tectona grandis] gi\|442742993\|ref\|YP_007353945.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.980 G3DSA:1.20.5.510 IPR005798 IPR005870 NON_CYTOPLASMIC_DOMAIN PF00032 PIRSF000033 PS51003 PTHR19271 PTHR19271:SF2 SSF81648 TIGR01156 TMhelix TRANSMEMBRANE cd00290	16
Ljchlorog3v0010800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytochrome b6/f complex subunit IV [Lotus japonicus] gi\|13518469\|ref\|NP_084828.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.980 G3DSA:1.20.5.510 IPR005798 IPR005870 NON_CYTOPLASMIC_DOMAIN PF00032 PIRSF000033 PS51003 PTHR19271 PTHR19271:SF2 SSF81648 TIGR01156 TMhelix TRANSMEMBRANE cd00290	16
LotjaGi1g1v0370700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem II reaction center X protein; TAIR: AT2G06520.1 photosystem II subunit X; Swiss-Prot: sp\|Q2JN82\|PSBX_SYNJB Photosystem II reaction center X protein; TrEMBL-Plants: tr\|I3T9R5\|I3T9R5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0370700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.5.510 IPR009518 NON_CYTOPLASMIC_DOMAIN PF06596 PTHR34455 PTHR34455:SF2 TMhelix TRANSMEMBRANE	9
LotjaGi4g1v0327200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem II reaction center X protein; TAIR: AT2G06520.1 photosystem II subunit X; Swiss-Prot: sp\|Q2JN82\|PSBX_SYNJB Photosystem II reaction center X protein; TrEMBL-Plants: tr\|A0A0L9UYC3\|A0A0L9UYC3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0327200	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.5.510 IPR009518 NON_CYTOPLASMIC_DOMAIN PF06596 PTHR34455 PTHR34455:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE	13
LotjaGi5g1v0223700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytochrome b6-f complex subunit 4; TAIR: ATCG00730.1 photosynthetic electron transfer D (ChrC); Swiss-Prot: sp\|Q9BBQ5\|PETD_LOTJA Cytochrome b6-f complex subunit 4; TrEMBL-Plants: tr\|A0A1D8R9R1\|A0A1D8R9R1_9MAGN Cytochrome b6-f complex subunit 4; Found in the gene: LotjaGi5g1v0223700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.980 G3DSA:1.20.5.510 IPR005798 IPR005870 IPR036150 MF_01344 NON_CYTOPLASMIC_DOMAIN PF00032 PIRSF000033 PS51003 PTHR19271 PTHR19271:SF16 SSF81648 TIGR01156 TMhelix TRANSMEMBRANE cd00290	18
LotjaGi5g1v0223700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytochrome b6-f complex subunit 4; TAIR: ATCG00730.1 photosynthetic electron transfer D (ChrC); Swiss-Prot: sp\|Q9BBQ5\|PETD_LOTJA Cytochrome b6-f complex subunit 4; TrEMBL-Plants: tr\|A0A1B1FK37\|A0A1B1FK37_POGCB Cytochrome b6-f complex subunit 4; Found in the gene: LotjaGi5g1v0223700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.980 G3DSA:1.20.5.510 IPR005798 IPR005870 IPR036150 NON_CYTOPLASMIC_DOMAIN PF00032 PIRSF000033 PS51003 PTHR19271 PTHR19271:SF16 SSF81648 TIGR01156 TMhelix TRANSMEMBRANE cd00290	17
LotjaGi6g1v0226600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem II reaction center X protein; TAIR: AT2G06520.1 photosystem II subunit X; Swiss-Prot: sp\|Q2JN82\|PSBX_SYNJB Photosystem II reaction center X protein; TrEMBL-Plants: tr\|I3S267\|I3S267_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0226600	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.5.510 IPR009518 NON_CYTOPLASMIC_DOMAIN PF06596 PTHR34455 PTHR34455:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE	13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	10.00