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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3289980 |
| Transcript ID | Lj1g3v3289980.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform 2 [Fragaria vesca subsp]. vesca] gi|470108279|ref|XP_004290449.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 8 | 19 | 12 | – | – | |
| Phobius | 20 | 27 | 8 | – | – | |
| Phobius | 28 | 186 | 159 | – | – | |
| PANTHER | 43 | 233 | 191 | 2.00E-244 | – | |
| PANTHER | 43 | 233 | 191 | 2.00E-244 | – | |
| Pfam | 70 | 171 | 102 | 1.50E-18 | ||
| Gene3D | 182 | 208 | 27 | 3.60E-04 | – | |
| Phobius | 187 | 211 | 25 | – | – | |
| TMHMM | 189 | 211 | 23 | – | – | |
| Gene3D | 209 | 346 | 138 | 2.50E-30 | – | |
| Phobius | 212 | 519 | 308 | – | – | |
| MobiDBLite | 222 | 260 | 39 | – | – | |
| PANTHER | 256 | 519 | 264 | 2.00E-244 | – | |
| PANTHER | 256 | 519 | 264 | 2.00E-244 | – | |
| SUPERFAMILY | 264 | 484 | 221 | 7.15E-73 | ||
| ProSiteProfiles | 285 | 519 | 235 | 37.912 | ||
| SMART | 285 | 513 | 229 | 5.10E-37 | ||
| Pfam | 285 | 500 | 216 | 3.70E-47 | ||
| ProSitePatterns | 291 | 313 | 23 | – | ||
| Gene3D | 347 | 486 | 140 | 2.90E-41 | – | |
| ProSitePatterns | 405 | 417 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v3289980.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3289980.3, powered by CORGI.
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