Domain Predictions — View

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G3DSA:2.60.40.1820

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0052900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein Lea14; TAIR: AT2G44060.1 Late embryogenesis abundant protein, group 2; Swiss-Prot: sp\|P46518\|LEA14_GOSHI Late embryogenesis abundant protein Lea14-A; TrEMBL-Plants: tr\|I3T4F6\|I3T4F6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0052900	Domains G3DSA:2.60.40.1820 IPR004864 IPR013990 PF03168 PTHR31459 PTHR31459:SF16 SM00769 SSF117070 mobidb-lite	9
LotjaGi1g1v0460800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant hydroxyproline-rich glycoprotein; TAIR: AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; Swiss-Prot: sp\|Q6DST1\|Y1465_ARATH Late embryogenesis abundant protein At1g64065; TrEMBL-Plants: tr\|K7MJ39\|K7MJ39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0460800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.40.1820 IPR004864 NON_CYTOPLASMIC_DOMAIN PF03168 PTHR31852 PTHR31852:SF52 SSF117070 TMhelix TRANSMEMBRANE	10
LotjaGi1g1v0481800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp\|P46519\|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr\|I3STX2\|I3STX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0481800	Domains G3DSA:2.60.40.1820 IPR004864 IPR013990 PF03168 PTHR31459 PTHR31459:SF15 SM00769 SSF117070	8
LotjaGi1g1v0481800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp\|P46519\|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr\|I3STX2\|I3STX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0481800	Domains G3DSA:2.60.40.1820 IPR004864 IPR013990 NON_CYTOPLASMIC_DOMAIN PF03168 PTHR31459 PTHR31459:SF15 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00769 SSF117070 SignalP-TM TMhelix	15
LotjaGi1g1v0481800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp\|P46519\|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr\|I3STX2\|I3STX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0481800	Domains G3DSA:2.60.40.1820 IPR004864 IPR013990 PF03168 PTHR31459 PTHR31459:SF15 SM00769 SSF117070	8
LotjaGi3g1v0053100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; TAIR: AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; Swiss-Prot: sp\|Q6DST1\|Y1465_ARATH Late embryogenesis abundant protein At1g64065; TrEMBL-Plants: tr\|I1JJY4\|I1JJY4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0053100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.40.1820 IPR004864 NON_CYTOPLASMIC_DOMAIN PF03168 PTHR31852 PTHR31852:SF52 SSF117070 TMhelix TRANSMEMBRANE	10
LotjaGi3g1v0053100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; TAIR: AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; Swiss-Prot: sp\|Q6DST1\|Y1465_ARATH Late embryogenesis abundant protein At1g64065; TrEMBL-Plants: tr\|I1JJY4\|I1JJY4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0053100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.40.1820 IPR004864 NON_CYTOPLASMIC_DOMAIN PF03168 PTHR31852 PTHR31852:SF52 SSF117070 TMhelix TRANSMEMBRANE	10
LotjaGi3g1v0053100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; TAIR: AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; Swiss-Prot: sp\|Q6DST1\|Y1465_ARATH Late embryogenesis abundant protein At1g64065; TrEMBL-Plants: tr\|I1JJY4\|I1JJY4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0053100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.40.1820 IPR004864 NON_CYTOPLASMIC_DOMAIN PF03168 PTHR31852 PTHR31852:SF52 SSF117070 TMhelix TRANSMEMBRANE	10
LotjaGi3g1v0053100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; TAIR: AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; Swiss-Prot: sp\|Q6DST1\|Y1465_ARATH Late embryogenesis abundant protein At1g64065; TrEMBL-Plants: tr\|I1JJY4\|I1JJY4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0053100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.40.1820 IPR004864 NON_CYTOPLASMIC_DOMAIN PF03168 PTHR31852 PTHR31852:SF52 SSF117070 TMhelix TRANSMEMBRANE	10
LotjaGi3g1v0388200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp\|P46519\|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr\|Q9XER5\|Q9XER5_SOYBN Seed maturation protein PM22; Found in the gene: LotjaGi3g1v0388200	Domains G3DSA:2.60.40.1820 IPR004864 IPR013990 PF03168 PTHR31459 PTHR31459:SF15 SM00769 SSF117070	8
LotjaGi6g1v0186500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein Lea14; TAIR: AT2G44060.1 Late embryogenesis abundant protein, group 2; Swiss-Prot: sp\|P46519\|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr\|C6T750\|C6T750_SOYBN Late-embryogenesis abundant protein 2; Found in the gene: LotjaGi6g1v0186500	Domains G3DSA:2.60.40.1820 IPR004864 IPR013990 PF03168 PTHR31459 PTHR31459:SF16 SM00769 SSF117070 mobidb-lite	9
LotjaGi6g1v0186500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein Lea14; TAIR: AT2G44060.1 Late embryogenesis abundant protein, group 2; Swiss-Prot: sp\|P46519\|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr\|C6T750\|C6T750_SOYBN Late-embryogenesis abundant protein 2; Found in the gene: LotjaGi6g1v0186500	Domains G3DSA:2.60.40.1820 IPR004864 IPR013990 PF03168 PTHR31459 PTHR31459:SF16 SM00769 SSF117070 mobidb-lite	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	8.33