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IPR003124

Description

IPR003124 is a WH2 domain.

<p>The WH2 (WASP-Homology 2, or Wiskott-Aldrich homology 2) domain is an ~18 amino acids actin-binding motif. This domain was first recognised as an essential element for the regulation of the cytoskeleton by the mammalian Actin nucleation-promoting factor WAS (also known asWiskott-Aldrich syndrome protein, WASP). WH2 proteins occur in eukaryotes from yeast to mammals, in insect viruses, and in some bacteria. The WH2 domain is found as a modular part of larger proteins; it can be associated with the WH1 or EVH1 domain [interpro:IPR000697] and with the CRIB domain [interpro:IPR000095], and the WH2 domain can occur as a tandem repeat. The WH2 domain binds actin monomers and can facilitate the assembly of actin monomers into newly forming actin filaments [[cite:PUB00016992], [cite:PUB00016993]].</p> <p>Some proteins known to contain a WH2 domain:</p> <ul> <li>Mammalian Actin nucleation-promoting factor WAS (WASP), a possible regulator of lymphocyte and platelet function. Defects in WASP are the cause of Wiskott- Aldrich syndrome (WAS), an X-linked recessive disease characterised by immune dysregulation and microthrombocytopenia. WASP proteins bind the actin nucleating protein complex Arp2/3.</li> <li>Mammalian N-WASP/WASL and WASF/SCAR/WAVE1-3, and yeast LAS17, which are also proteins from the WASP family that participate in the transduction of signals from the cell surface to the actin cytoskeleton.</li> <li>WAS protein family homologue 1 (WASH1), acts as a nucleation-promoting factor at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerisation.</li> <li>Baker's yeast Verprolin, a protein involved in cytoskeletal organisation and cellular growth.</li> <li>Human WASP interacting protein (WASPIP/WIP), a WASP-, profilin- and actin-binding protein which induces actin polymerisation and redistribution.</li> <li>Nuclear polyhedrosis virus (NPV) P61/78/83 capsid protein, which may be important for the persistence and survival of the virus.</li> <li>Fruit fly Spir(e) protein, an actin nucleation factor involved in the development of oocytes and embryos. Spir is conserved among metazoans.</li> <li>Mammalian metastasis suppressor 1 or Missing in Metastasis (MIM) protein, an actin-binding protein that may be related to cancer progression or tumor metastasis.</li> </ul>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Actin binding Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.

Associated Lotus transcripts 5

Transcript Name Description Predicted domains Domain count
PREDICTED: protein SCAR2-like isoform X2 [Cicer arietinum] gi|502147559|ref|XP_004506831.1| 6
PREDICTED: protein SCAR2-like isoform X1 [Cicer arietinum] gi|502147557|ref|XP_004506830.1| 6
PREDICTED: protein SCAR3-like [Glycine max] gi|356528322|ref|XP_003532753.1| 8
Protein SCAR2; TAIR: AT2G38440.1 SCAR homolog 2; Swiss-Prot: sp|Q5XPJ9|SCAR2_ARATH Protein SCAR2; TrEMBL-Plants: tr|A0A0B2RJ71|A0A0B2RJ71_GLYSO Protein SCAR2; Found in the gene: LotjaGi3g1v0202300 8
Protein SCAR2; TAIR: AT2G38440.1 SCAR homolog 2; Swiss-Prot: sp|Q5XPJ9|SCAR2_ARATH Protein SCAR2; TrEMBL-Plants: tr|A0A0B2RJ71|A0A0B2RJ71_GLYSO Protein SCAR2; Found in the gene: LotjaGi3g1v0202300 8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 20.00