Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0202300 |
| Transcript ID | LotjaGi3g1v0202300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein SCAR2; TAIR: AT2G38440.1 SCAR homolog 2; Swiss-Prot: sp|Q5XPJ9|SCAR2_ARATH Protein SCAR2; TrEMBL-Plants: tr|A0A0B2RJ71|A0A0B2RJ71_GLYSO Protein SCAR2; Found in the gene: LotjaGi3g1v0202300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:29526094..29534811) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAATCCAACTCGGTTCGGTGAAAGATTAATAAATACCCCTCTGATGTGTTGCTGTCTAGTAGCATTCTTCACTGTCT TCACGTCTGTGACTGTCGCTCACACCCACCACCACCACCACCGTATCTTCATTCATTTCACATTTCATTACCCCAAATAA TTTCCAAATAAAAAAAAAACAAAAACTCTCTCTCTCTCTCTCCTCCTCTGTTTCTCTCTCTTCCATGGTGGAACGCGGAG GAAGCTACAGAGTCGTCGTCGTCGCCGGAAGAAGAACGAAGATCGAAGAAGAGGTGAAACTGAAGGAGTCAAGAGGATTG CAGAAGAAAGTAGGGTTTGTGAATCGCTGATTTCGAAGAAGAAGAATGCCGCTCTCGAAGTACCTGATACGGAACGAGTA TGGCTTGGCGGATCCCGAGCTCTACCGTGCCGCCGACAAAGATGATCCTGAAGCTCTTCTTGAAGGCGTCGCCATGGCTG GTCTCGTTGGACTCCTGCGCCAGCTCGGTGACCTTGCCGAGTTAGTTTCCTCTTCCTCTTCTTCTTCTTCTTCTAGCTCT CTCTTTTTTGAGTATTTTCATTGTGTGATTCTGATGTGGTGCTGCTTAGTTTCAGAAAGGAAATAATCTGAGTTTTGTGT TGGTGTGAGCTTAATTAGGCAAGGTTTTCACGCTTTTTGGACTCGGTTTCCGTTTGTTCTGAATTGGAGGAAAATTCAGA TGCTTAATTCTGTGTTTTTTTGTTATGGTTAATTGGTCATAATTTGAATACTCAATTTTGCTTCCTAATTTGGTGCTTTT TTAGGTAGAGTTTTGAAGGGGGGAAGTAGATAAATAAGAAGGCAAAATGAGCTGTTGTAGTGTACAGAATGGTTCAAATT GTGTAGAAATGGTGATTTTGGGTGAAACTTTGTGGATAGTTTCTACTTGTTGCTCTGTTTGCTGAGATTGGATTTGTCTG AATTTGGTTGACTAATCGTTGACTATAAATCTTGAGCTATCGATGTTCCTCATAGGTTTTGGAAGCTATAGTTGTTGGCT TTTCAATGTGATCTGACTAATGGAAGTGTAATTTTTGTTTAGCATTTGTTAGTAGAAAAAGCAATTTTGTAGAACATTTT ATAGCTGAGTTGAATTAAACTATTAGTGTTGGAGTCTCTATTAAGGTTTAATCTTAACTTATGATCTGCTATATGCCCAA CCTCCTCAACCACCGCCTGAACTAACCCTTGGAGGCTTAATCTTGTCAATTTGGTTCAAATAATTCTAGGTGGAAAATTT ATATCTCTTGCCGGAGTTGTGATGGTTGTGGCATTTTGTATTGGGTTATATGAAGTTAGTTCTATTTAGAAAAGTTCCAG CTGCACTGGGATATCTGAAGTTGTTTCCTGCTACTTGTAGCGCAGGCAACTTTCATCCCAGCATCAACATTTAACTTTCT AGATTAGATTTTTTACAGTCACTTGGTACTCGTAAGTTCTAAGCATATAAGTATTTTGTTTTGGTTAGGTTTGCTGCTGA GATCTTCCATGATTTACATGAAGAAGTGATGGCTACTGCTGCAAGAGGCCATGGTCTTATGTCTCGTGTTAAACAGCTTG AGGCTGAAGTTCCTTCACTTGAGAAAGCTTTTTTCTCTCAAACTCATCATTCATCATTCTTCACTAATGGAGGTTAGATT AGTCATCACAGAGTTCTTTTGTATATTATTTGGGTTTGTCGTCATGATTTTAATGCTGTTAATCTTGTAAAATGCTGAAA TTTTGGTTAAAGTTGTAACTTTAAGTGTAGCTGCACTCCCTTCTCTACTTTAACCATATTTTCTTGCTTATTGCATTCTA GGGATTGATTGGCATCCTAATCTTCGGTCTGAACAAAACCTTGTTACTCGTGGAAACTTTCCTCGACTGATAATGGATTC ATATGAAGAATGTCGTGGTCCCCCGAGACTATTCCTTCTGGATAAGTATGTTCACCTGATTAATCAGGCATAATTGATTT CAACATATATAGAAAAAGATTATTTTGTTATGGTTTGAAGATATTTTATTTTGGCTTCTCTGAAGGTTTGATGTGGCTGG CGCTGGGGCTTGTCTGAAACGTTATACCGATCCATCATTCTTTAAAGTGGAACCAGCTTCATCTGTTAGGGCTACAGTAG ATGTCCACAGGGAAAAGAGAATTCGTAAATTCAAGGTACTAAATTTACAATATTTCTACCATTCATTGACCTACTTTTTA GCTGGAGAACTGTTTTAAGTGCAAGATCCTGATTGGTTTGGTGTTTATTATTTGGCTGGGATCTTGCTACAAATTTGTAA ATTATAATTGAAATAGAATGATGTGAATTATGTGGTTCTTTGATGGATACATATGAAGGTTGTCAAACTCGAGAGTCTTC TTAAACTTGTGAAAGCTTCCATACACTCAACTCTTCACCTCGTAAGAGTTTACCTAATGTTAAAATAATTTTTAAGAAAC CGAACATAGAAAATAGTACTCAAAAAACAGAATTATGTACATAATATGGTTTTATATTACACAATATTATATACTATACA TTTGGGAAGCTTAATACGCTGACAAAATCCCAAGTCCCCAACATTTCAAAGCATGTCACAATGAAGGAAAAACCAGCAAA ACGAATCATCATGCAAATAATTTAAAAAATGCATCTATATGTAATGTAACACAATAATAAAGATATAAGTATTGTGACGT TATTATTTGTAGTATGCTCACAAATTTGGTGGAAGAATTATTTGGAAAATTTGTGTTCCAGGCTTCCAGCACCTGGATAC TATTTACATATTAAGTGCTAATAATAATGTCACATGATTTACATCTTCCGTATTATTGTGTTACATATAAATGTATTTTT TTCCACAGCAGAATACAATTTGTTGAACAGAACACATAAATCATATTCATAAGTGATATTGAAGTTTGCAGATAGCATTG ATAACAAAACAAGTTGCAAAAAAGGATTGGAATGTGCAACTTTTTTCGAGAGTCATGACCTATATTGCTGGTCAGTGGTC ACAATTTGCAAAATTGAACAAGATTGGTTTGCACTGTGTTCTAAGTTGATGCAGAATAGTGATTGAAGGGGATAACCGAG TCATGGATGTTTCGGGGAAAATTTTGATCCAAAAAGTGGACTTGTTGACTGAGTTGTGGACTCAAGATTTTATGTTGAGT TTGAATAGTCTACTAGAGTTTACCTGATTCTATCAAGAAAAGAGTCATAGTCAACTCTTTTTTCTTACCTAGAGTTGCAA ACTCATGATTCTGCAAGTTAGCTCGATAGTTTGACAACCATGTTTATACCACAGGAAAACTGTTTCATACCATAAAAATC AAATACTTACTGTCTTAATTATTTCTTTCATTTCCAGCAGAAGAAAGGAGCACGGTTGAGGGATGGTGAAGCCCCTAATG TTGTACCAACACATTCAAAGTAAGCTTCAATAACTTCAATGTGGTGCTTAATATACTCTTCCGGTTAGGTCTTTAAATGT TGATTGGCTCATTTTTAATTTTTATTATTGCAGATTACACCAGCTGCTTCTTGAGGAGCGTATTGAGAATGGTTATAGCA ATCCTGCACGTCTAGTGAAGTTGAAGAAAAGACAATTTAATGGACCTACAGTTGACGCAAAAGCTGGGAAAAGTTACATG GAGAAATTTCTGGAAACTCCCTCACCTGATCATAAGATGATCTGTGAAACTTCTATCTTTCCGCTGCCTGTGGAACCGAC TTCGGATGATACTACTGAAGCGAGGATTAAAATTCTTGAAATCAGTAGCTTTAATCCTGTAAAGAAGTCATTGAGAAATG AAAATAACCGTTCATCACCTAATGAACAGGAAAAACTTGAATTAGAACTAAAACCATTTTCAAAAGTGGGTGGTGAGACA AATAGAGATATTGTAAAGGTGAAAGAACCAGCTGGTGTGGCAGCAGATGAAATGTCTTATATTCATCTCAAGTTGCCTGA TGAGGTAAAAATGGCAATCAGTGAACGTAAGAAGATAGAAGGCAGCTTAGATGGGTACCATTCTGATGACGTGACTAGTG AAGTTGACAATTACTTGGATGCATTAACTACCATGGAGTCAGAATTGGACACCGACAATGAGTATAAACCCAAGAAAAAA TTCTTGAATATTCAAAAGATAGTAGATATCAATGATAAAGAACAACAACTGCAAGCTCGACTTTCAGATTCTCAATCATT TGGAGACTCCTCAACATCAGATGACATTAGTTCATTCAAACAAGATAGAAATGAAGAACATATAGAAGTGCAAGCTCAGT CATCAGATTCTCACTCAACTGGATCCTCCTCTATATCAGACAATAATGGCTCATTCAGAAGAGAGCGAGAAGAGCATATA GAACTGCAAGCTCACTTTTCAGATTCTCGATCTATTAGAAACTCCTCTTCATCAGAAGAAAATATTTCATTCAAAAAAGA CAGGTCATATTTCCCTCACTTTGATTCATCAAGCACTGTGGTCGAAAATGTACAATCAGAACCTATGTTCACAAAAACAA ATAATTGTGAACCGGAGATTGATGATACAAAATCCATCCAATTTCCCCAAATTGCTGAGTTTCAAAACACAGATTGTGGG ATATTTGTCATGCATGATAATACACATACTCAAGAAGGAGAGATATCTGATTCTGTGCGGGCCTCATCTGATCTGATAAC TTCAGGACTAGTGTTGTCTTCTGATCTTGGACCTGCCTCACCTGTGGTCCTACCTGCAGGGACCCAATCAGATGAAACTT CACCTGACCCTATTGAACTTAATTCAAGATTAGAGAATGATGCGGACAAAAATGCACATGTTGAATCTATTGCTTCTGAA CCTGTTTCTCTCTCCCCAATAGAAGATGATGATTTCGCTGTGGATTCTCCTGATAAAATTTCATCAGGCAAATTGGATGG TTATGATGATCCTGTTATTCATTCTGATGATTCATTACAAGTTTCCAATGATTTAGCATTAGCTCATGGAGATGAACATT GTGATGATTCTGTAATCAAAATTCTCCAAGCACAATCTCCTGAAGAAAATTCTTCTAAAATTTCGGTTTGTAGAGATATT AGTTCACAAGGAGATGATCCTATTTGCCCGTCCATGGAAGAATTAGACATGGATTCAAGTATCACTGTGGCGCTTGATTG TCAAGGCTCAAAAGATGAGGGTTCTATTATGGCACACCAAGCTGATTTGGAAGATTTATCTCCTGCTGTCGAGGTTCCTC AAGTGAGTTGCTTTACTAGAGAGCCATTTTCTGATTTGACTTGCAATAATCCACAGGATGTACCAGGCTCAGCAGAACTG GAAGTTTCAAATTCTGGTCTGCAATCAAATTTTGAAGAGATGCCAAAAATGGGGCGTAGTGATGAAATAAATGGATCCAC CCGCGATGTTGATCCAGTTGATGGTGATGGTTGTTTTAAGTGTCCATCTGTTGACAATCATGTGATCGTAAATGGTGTGG TTACCGAAATTGTTCAGTCAGAAGATCAGGCTGTATATTCAGTTCCTTCTGTTGATACTGATGAAAATGACTCGGGCGTT GGTGCTTGTCCTGCTTCAGGTCTGATTTCTGCTCCATCAACGAGTTTTTCAAATTCGCAAGAGCCAGTGTTAGGTTCGTC AAATTCTTATCAGATGGAAATTGAATCCCAAACAGTAGAAGAGTCTATTTCTGATTTTGCTGATCCACATAAGAAAGAGA TTGATGTCAATGATGCAGTTGCTAGGGAATCTTTGACAGAACTAGATGGAACGAAGACAGTGGGTCATCTAGAAATTGCT TCTCCTGATGCACCATTGAACTCAAACAATCTGGTTCCCGGTGATCTTTCAGATTCAGGAATATGTGATGATATTCAAAA GTCATCTCCAAGGGAGAAACTCCAACACAGTGATTTTGTTGATGATGCAAAAATGGCGCCTGAATATTCAGGGTTAGACA CTCATCTGTCAGGACCTATATTTTGTGGCCAGAATGGTCTTTTACAGAATGGCAGAGATAGCGTCTCATCACCTTCTCAT AACCAGCTGGATTCTCTGACTGACTTAGAACCGTTCTCACAATCTCAAGTTGGTGAACAGAATGCAAAATTTCTGATCAG AAATGACGAAAACTTCACCTCTGAGAAATCTCAATATCAGAAGATGCAGATATATCAATTGGAGCAAGAAGACACTCGTG CTACTTCTGAATCTGTTTCTGAAATCCATGAAGATGAGCCATCATCATTTTATTCCATACCAGATAAGGCAACTGAAAAC AATCTGGATCAGATGCCCCCTATGCCCCCGTTACCACCAATGCAATGGAGAATGGGGAAGTTTCAACATGACTCCCTGGA TTTACAGAGAGAATTAGAACCAAGTCAGGCTTCAGTCCAACCAATGCAGCCAATTAAACCTGATATGAATACTCAATTTA GTTTGCCGTCTCCTGAGAGTACCTTGCTGTATCAGACTCCATTTTTTCCTGTGATGGCTGTAGAAAATGATAAGCTCCAA CATCCTTCTGTGGATGTTTCAGGGAATCCTGTTGCTGTACCTTTACAACTTCCTCTCATGGTTAATGATGCAAAAGGTCA ATATAATTACGTAGTGCTGGACAGAAACCAAATTCAGAACCCCTTCTTGACATTACCTGTGGTATCTACCGGCATGCCTT CACATGGCTACACTGTTGCTTCTGAGGGAGAAATGATCCACACATCAAACCTGTACTCCCCAATACTGCCTGCTGCATAT GCTGTATCCGGTCATGATTCCACCGCTCCACATGAGAAACCAATTCAACCTCCAAGTCAATTAATGAGAGAGACTAGTTC AGATGATAAAACACTTCAGCAGTCTATAGGTAATGTGGTATCTAGGGGTTCGCCTCAAGAGAGTCAAATTATTGCTTCTT ATGGAGAAACGGTAGATAATTCAAACCCATGCCCTCCAATACCCCTTGCTGAATGTTCTGTTTCTGGATATGAGTCCATC TCTCCTCAAGAAAAACTGATTCAATCTCCAAGTGAGTTAATGATGGACTCCAGTTCAGATGATAAAACAGTTTCACAGTC TATAAGTGATGTGATATCTGTGGACAGGCCTCAACACGTTGCTTCTGAGGGAATAATGCTACAAAATTCTAAGGCATGCC CTCCTACACACTCTGCTGGATGTGCTGTTTCTGGACATGATTCCATCTCTCCTCAAGATGAACTGACTCAGCTTTCTAAT CAATTAGTGACGGAGACTAGTTCAGAAGTTAAAACACTTCATCAGCCTATGAGTAGCGTGGAAGGGGAAGAAGGACGTCC GTGTATGTCACTCATGTCAGCACCAAACATGGGAAGTATGGAGCTTAATCAGAGTTTCCTGCCCTTTGAGGGGGAAATGG TATCGTCCTTAGACACATCAGATTTTGATAGTGAAAGGACAAATGGAAAACCGAAGAATAAGCTTCCCCGTCCTCGGAGT CCTCTAATTGATGCTGTTGCTGCTCATGACAAAAGCAAGGTGAGTCAGCTTCTAGTTCTTATAGGACATTGAATCTCTGT TTGAGGCGTTAATTTGTGCATAACACTTTATCTCTGAACCACTGCAGCTTAGGAGAGCTACTGAACGGGTTATGCCTCAA ATAGCTCCAAAGCTAGATGAAAGAGATTCATTGTTAGAGCAGATAAGAACAAAGGTTAGAGCTTCCACCTTGTTTCTTTC TGCTGATCGTACCCTTTTTATATTCAATGCTTCAGTTGATTTAAAAATACTTGTTGGTTCTCTCAGTCCTTCAACTTGAA GCCTGCTGTGGCGACACGACCTAGCATTCATGGTCCGAAAACAAATTTGAGGGTAGCTGCCATCTTGGAGAAAGCAAATG CAATTCGCCAGGTCTCATGCTCTCTTTTCTCAGTTCTTGTTACTACAATTGTCGTCTACTCCTCTTACCGTCCTTTTTCT TCTGGCTCAACTAATATGTCAATTATTGAAATAGGCTTTAGCTGGAAGTGATGAAGATGATGATGATAGTTGGAGTGATT CTTGAATTTACAATGAGAAGTGATCTCAGCTGGTGGACGTTTGTATATTCTGGTTCTGTCTTGAACCGGGTCTAAAAAGC CATTCTCCCCAGTAATGATTAGGAATTCTCAATGCAAGGTTCTTTATCCTAGTGTTCATACATGGTTCTCTGAATAGCTC CTCTTTGTCCTTTTTCTTCACACATATACAAATGAACATTGGTACTACTGTACGAGCATGCGGTTTCGGAGGTGAAACTC ACATCATTTGAGACAGCTCAGGCTCAGCGTGCAAGCGCTGTACCCGTCGATCAACCTATCGAGAATTAGCCCCATACCTC CTGTTCATATAAGTGCATATATATTGTGTTATCATATTTTTTATTTATTTTTAGTCATGAGTTTCCAATTTTGTAATTCT GTAATTTAGCGTTTGGGGATAATTGTCCCATTTATCATGTAGTCCATCAGTGTTAATACATATAAATACAAACGTGAGTA AAATCATTTCAGTGTACAGTTTCTATCAGTAACCTTTGTTCCATAATCCACTTTTCTTTAGTAGTTCTTCTCATATATGA GCAAGTTACATTGGAAACTTGCAGTGGTAAATAAAATTGGTCATAGATGAACTTGAATGAAATATTCTGATTGATTAT
CDS sequence (LotjaGi3g1v0202300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGCTCTCGAAGTACCTGATACGGAACGAGTATGGCTTGGCGGATCCCGAGCTCTACCGTGCCGCCGACAAAGATGA TCCTGAAGCTCTTCTTGAAGGCGTCGCCATGGCTGGTCTCGTTGGACTCCTGCGCCAGCTCGGTGACCTTGCCGAGTTTG CTGCTGAGATCTTCCATGATTTACATGAAGAAGTGATGGCTACTGCTGCAAGAGGCCATGGTCTTATGTCTCGTGTTAAA CAGCTTGAGGCTGAAGTTCCTTCACTTGAGAAAGCTTTTTTCTCTCAAACTCATCATTCATCATTCTTCACTAATGGAGG GATTGATTGGCATCCTAATCTTCGGTCTGAACAAAACCTTGTTACTCGTGGAAACTTTCCTCGACTGATAATGGATTCAT ATGAAGAATGTCGTGGTCCCCCGAGACTATTCCTTCTGGATAAGTTTGATGTGGCTGGCGCTGGGGCTTGTCTGAAACGT TATACCGATCCATCATTCTTTAAAGTGGAACCAGCTTCATCTGTTAGGGCTACAGTAGATGTCCACAGGGAAAAGAGAAT TCGTAAATTCAAGCAGAAGAAAGGAGCACGGTTGAGGGATGGTGAAGCCCCTAATGTTGTACCAACACATTCAAAATTAC ACCAGCTGCTTCTTGAGGAGCGTATTGAGAATGGTTATAGCAATCCTGCACGTCTAGTGAAGTTGAAGAAAAGACAATTT AATGGACCTACAGTTGACGCAAAAGCTGGGAAAAGTTACATGGAGAAATTTCTGGAAACTCCCTCACCTGATCATAAGAT GATCTGTGAAACTTCTATCTTTCCGCTGCCTGTGGAACCGACTTCGGATGATACTACTGAAGCGAGGATTAAAATTCTTG AAATCAGTAGCTTTAATCCTGTAAAGAAGTCATTGAGAAATGAAAATAACCGTTCATCACCTAATGAACAGGAAAAACTT GAATTAGAACTAAAACCATTTTCAAAAGTGGGTGGTGAGACAAATAGAGATATTGTAAAGGTGAAAGAACCAGCTGGTGT GGCAGCAGATGAAATGTCTTATATTCATCTCAAGTTGCCTGATGAGGTAAAAATGGCAATCAGTGAACGTAAGAAGATAG AAGGCAGCTTAGATGGGTACCATTCTGATGACGTGACTAGTGAAGTTGACAATTACTTGGATGCATTAACTACCATGGAG TCAGAATTGGACACCGACAATGAGTATAAACCCAAGAAAAAATTCTTGAATATTCAAAAGATAGTAGATATCAATGATAA AGAACAACAACTGCAAGCTCGACTTTCAGATTCTCAATCATTTGGAGACTCCTCAACATCAGATGACATTAGTTCATTCA AACAAGATAGAAATGAAGAACATATAGAAGTGCAAGCTCAGTCATCAGATTCTCACTCAACTGGATCCTCCTCTATATCA GACAATAATGGCTCATTCAGAAGAGAGCGAGAAGAGCATATAGAACTGCAAGCTCACTTTTCAGATTCTCGATCTATTAG AAACTCCTCTTCATCAGAAGAAAATATTTCATTCAAAAAAGACAGGTCATATTTCCCTCACTTTGATTCATCAAGCACTG TGGTCGAAAATGTACAATCAGAACCTATGTTCACAAAAACAAATAATTGTGAACCGGAGATTGATGATACAAAATCCATC CAATTTCCCCAAATTGCTGAGTTTCAAAACACAGATTGTGGGATATTTGTCATGCATGATAATACACATACTCAAGAAGG AGAGATATCTGATTCTGTGCGGGCCTCATCTGATCTGATAACTTCAGGACTAGTGTTGTCTTCTGATCTTGGACCTGCCT CACCTGTGGTCCTACCTGCAGGGACCCAATCAGATGAAACTTCACCTGACCCTATTGAACTTAATTCAAGATTAGAGAAT GATGCGGACAAAAATGCACATGTTGAATCTATTGCTTCTGAACCTGTTTCTCTCTCCCCAATAGAAGATGATGATTTCGC TGTGGATTCTCCTGATAAAATTTCATCAGGCAAATTGGATGGTTATGATGATCCTGTTATTCATTCTGATGATTCATTAC AAGTTTCCAATGATTTAGCATTAGCTCATGGAGATGAACATTGTGATGATTCTGTAATCAAAATTCTCCAAGCACAATCT CCTGAAGAAAATTCTTCTAAAATTTCGGTTTGTAGAGATATTAGTTCACAAGGAGATGATCCTATTTGCCCGTCCATGGA AGAATTAGACATGGATTCAAGTATCACTGTGGCGCTTGATTGTCAAGGCTCAAAAGATGAGGGTTCTATTATGGCACACC AAGCTGATTTGGAAGATTTATCTCCTGCTGTCGAGGTTCCTCAAGTGAGTTGCTTTACTAGAGAGCCATTTTCTGATTTG ACTTGCAATAATCCACAGGATGTACCAGGCTCAGCAGAACTGGAAGTTTCAAATTCTGGTCTGCAATCAAATTTTGAAGA GATGCCAAAAATGGGGCGTAGTGATGAAATAAATGGATCCACCCGCGATGTTGATCCAGTTGATGGTGATGGTTGTTTTA AGTGTCCATCTGTTGACAATCATGTGATCGTAAATGGTGTGGTTACCGAAATTGTTCAGTCAGAAGATCAGGCTGTATAT TCAGTTCCTTCTGTTGATACTGATGAAAATGACTCGGGCGTTGGTGCTTGTCCTGCTTCAGGTCTGATTTCTGCTCCATC AACGAGTTTTTCAAATTCGCAAGAGCCAGTGTTAGGTTCGTCAAATTCTTATCAGATGGAAATTGAATCCCAAACAGTAG AAGAGTCTATTTCTGATTTTGCTGATCCACATAAGAAAGAGATTGATGTCAATGATGCAGTTGCTAGGGAATCTTTGACA GAACTAGATGGAACGAAGACAGTGGGTCATCTAGAAATTGCTTCTCCTGATGCACCATTGAACTCAAACAATCTGGTTCC CGGTGATCTTTCAGATTCAGGAATATGTGATGATATTCAAAAGTCATCTCCAAGGGAGAAACTCCAACACAGTGATTTTG TTGATGATGCAAAAATGGCGCCTGAATATTCAGGGTTAGACACTCATCTGTCAGGACCTATATTTTGTGGCCAGAATGGT CTTTTACAGAATGGCAGAGATAGCGTCTCATCACCTTCTCATAACCAGCTGGATTCTCTGACTGACTTAGAACCGTTCTC ACAATCTCAAGTTGGTGAACAGAATGCAAAATTTCTGATCAGAAATGACGAAAACTTCACCTCTGAGAAATCTCAATATC AGAAGATGCAGATATATCAATTGGAGCAAGAAGACACTCGTGCTACTTCTGAATCTGTTTCTGAAATCCATGAAGATGAG CCATCATCATTTTATTCCATACCAGATAAGGCAACTGAAAACAATCTGGATCAGATGCCCCCTATGCCCCCGTTACCACC AATGCAATGGAGAATGGGGAAGTTTCAACATGACTCCCTGGATTTACAGAGAGAATTAGAACCAAGTCAGGCTTCAGTCC AACCAATGCAGCCAATTAAACCTGATATGAATACTCAATTTAGTTTGCCGTCTCCTGAGAGTACCTTGCTGTATCAGACT CCATTTTTTCCTGTGATGGCTGTAGAAAATGATAAGCTCCAACATCCTTCTGTGGATGTTTCAGGGAATCCTGTTGCTGT ACCTTTACAACTTCCTCTCATGGTTAATGATGCAAAAGGTCAATATAATTACGTAGTGCTGGACAGAAACCAAATTCAGA ACCCCTTCTTGACATTACCTGTGGTATCTACCGGCATGCCTTCACATGGCTACACTGTTGCTTCTGAGGGAGAAATGATC CACACATCAAACCTGTACTCCCCAATACTGCCTGCTGCATATGCTGTATCCGGTCATGATTCCACCGCTCCACATGAGAA ACCAATTCAACCTCCAAGTCAATTAATGAGAGAGACTAGTTCAGATGATAAAACACTTCAGCAGTCTATAGGTAATGTGG TATCTAGGGGTTCGCCTCAAGAGAGTCAAATTATTGCTTCTTATGGAGAAACGGTAGATAATTCAAACCCATGCCCTCCA ATACCCCTTGCTGAATGTTCTGTTTCTGGATATGAGTCCATCTCTCCTCAAGAAAAACTGATTCAATCTCCAAGTGAGTT AATGATGGACTCCAGTTCAGATGATAAAACAGTTTCACAGTCTATAAGTGATGTGATATCTGTGGACAGGCCTCAACACG TTGCTTCTGAGGGAATAATGCTACAAAATTCTAAGGCATGCCCTCCTACACACTCTGCTGGATGTGCTGTTTCTGGACAT GATTCCATCTCTCCTCAAGATGAACTGACTCAGCTTTCTAATCAATTAGTGACGGAGACTAGTTCAGAAGTTAAAACACT TCATCAGCCTATGAGTAGCGTGGAAGGGGAAGAAGGACGTCCGTGTATGTCACTCATGTCAGCACCAAACATGGGAAGTA TGGAGCTTAATCAGAGTTTCCTGCCCTTTGAGGGGGAAATGGTATCGTCCTTAGACACATCAGATTTTGATAGTGAAAGG ACAAATGGAAAACCGAAGAATAAGCTTCCCCGTCCTCGGAGTCCTCTAATTGATGCTGTTGCTGCTCATGACAAAAGCAA GCTTAGGAGAGCTACTGAACGGGTTATGCCTCAAATAGCTCCAAAGCTAGATGAAAGAGATTCATTGTTAGAGCAGATAA GAACAAAGTCCTTCAACTTGAAGCCTGCTGTGGCGACACGACCTAGCATTCATGGTCCGAAAACAAATTTGAGGGTAGCT GCCATCTTGGAGAAAGCAAATGCAATTCGCCAGGCTTTAGCTGGAAGTGATGAAGATGATGATGATAGTTGGAGTGATTC TTGA
Protein sequence (LotjaGi3g1v0202300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLSKYLIRNEYGLADPELYRAADKDDPEALLEGVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATAARGHGLMSRVK QLEAEVPSLEKAFFSQTHHSSFFTNGGIDWHPNLRSEQNLVTRGNFPRLIMDSYEECRGPPRLFLLDKFDVAGAGACLKR YTDPSFFKVEPASSVRATVDVHREKRIRKFKQKKGARLRDGEAPNVVPTHSKLHQLLLEERIENGYSNPARLVKLKKRQF NGPTVDAKAGKSYMEKFLETPSPDHKMICETSIFPLPVEPTSDDTTEARIKILEISSFNPVKKSLRNENNRSSPNEQEKL ELELKPFSKVGGETNRDIVKVKEPAGVAADEMSYIHLKLPDEVKMAISERKKIEGSLDGYHSDDVTSEVDNYLDALTTME SELDTDNEYKPKKKFLNIQKIVDINDKEQQLQARLSDSQSFGDSSTSDDISSFKQDRNEEHIEVQAQSSDSHSTGSSSIS DNNGSFRREREEHIELQAHFSDSRSIRNSSSSEENISFKKDRSYFPHFDSSSTVVENVQSEPMFTKTNNCEPEIDDTKSI QFPQIAEFQNTDCGIFVMHDNTHTQEGEISDSVRASSDLITSGLVLSSDLGPASPVVLPAGTQSDETSPDPIELNSRLEN DADKNAHVESIASEPVSLSPIEDDDFAVDSPDKISSGKLDGYDDPVIHSDDSLQVSNDLALAHGDEHCDDSVIKILQAQS PEENSSKISVCRDISSQGDDPICPSMEELDMDSSITVALDCQGSKDEGSIMAHQADLEDLSPAVEVPQVSCFTREPFSDL TCNNPQDVPGSAELEVSNSGLQSNFEEMPKMGRSDEINGSTRDVDPVDGDGCFKCPSVDNHVIVNGVVTEIVQSEDQAVY SVPSVDTDENDSGVGACPASGLISAPSTSFSNSQEPVLGSSNSYQMEIESQTVEESISDFADPHKKEIDVNDAVARESLT ELDGTKTVGHLEIASPDAPLNSNNLVPGDLSDSGICDDIQKSSPREKLQHSDFVDDAKMAPEYSGLDTHLSGPIFCGQNG LLQNGRDSVSSPSHNQLDSLTDLEPFSQSQVGEQNAKFLIRNDENFTSEKSQYQKMQIYQLEQEDTRATSESVSEIHEDE PSSFYSIPDKATENNLDQMPPMPPLPPMQWRMGKFQHDSLDLQRELEPSQASVQPMQPIKPDMNTQFSLPSPESTLLYQT PFFPVMAVENDKLQHPSVDVSGNPVAVPLQLPLMVNDAKGQYNYVVLDRNQIQNPFLTLPVVSTGMPSHGYTVASEGEMI HTSNLYSPILPAAYAVSGHDSTAPHEKPIQPPSQLMRETSSDDKTLQQSIGNVVSRGSPQESQIIASYGETVDNSNPCPP IPLAECSVSGYESISPQEKLIQSPSELMMDSSSDDKTVSQSISDVISVDRPQHVASEGIMLQNSKACPPTHSAGCAVSGH DSISPQDELTQLSNQLVTETSSEVKTLHQPMSSVEGEEGRPCMSLMSAPNMGSMELNQSFLPFEGEMVSSLDTSDFDSER TNGKPKNKLPRPRSPLIDAVAAHDKSKLRRATERVMPQIAPKLDERDSLLEQIRTKSFNLKPAVATRPSIHGPKTNLRVA AILEKANAIRQALAGSDEDDDDSWSDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1627 | 1627 | 0.0 | ||
| Gene3D | 1 | 90 | 90 | 2.7E-9 | – | |
| PANTHER | 1 | 1627 | 1627 | 0.0 | – | |
| Gene3D | 108 | 207 | 100 | 1.1E-9 | – | |
| MobiDBLite | 431 | 486 | 56 | - | – | |
| MobiDBLite | 431 | 449 | 19 | - | – | |
| MobiDBLite | 450 | 466 | 17 | - | – | |
| MobiDBLite | 467 | 483 | 17 | - | – | |
| MobiDBLite | 611 | 636 | 26 | - | – | |
| MobiDBLite | 620 | 634 | 15 | - | – | |
| MobiDBLite | 651 | 683 | 33 | - | – | |
| MobiDBLite | 666 | 683 | 18 | - | – | |
| MobiDBLite | 1107 | 1127 | 21 | - | – | |
| MobiDBLite | 1108 | 1124 | 17 | - | – | |
| MobiDBLite | 1298 | 1339 | 42 | - | – | |
| MobiDBLite | 1313 | 1339 | 27 | - | – | |
| MobiDBLite | 1511 | 1534 | 24 | - | – | |
| ProSiteProfiles | 1565 | 1583 | 19 | 7.795 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Actin binding | Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. | ||
| Cellular component | Cytoskeleton | Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. | ||
| Biological process | Actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. |
Expression pattern of LotjaGi3g1v0202300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…