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IPR003742

Source: InterPro

Description

IPR003742 is a RNA methyltransferase RlmH.

<p>Methyltransferases (Mtases) are responsible for the transfer of methyl groups between two molecules. The transfer of the methyl group from the ubiquitous S-adenosyl-L-methionine (AdoMet) to nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms. The reactions are catalysed by Mtases and modify DNA, RNA, proteins or small molecules, such as catechol, for regulatory purposes. Members of this family are predicted to be Mtases based on the crystal structure (1TO0) and its close structural homology to other structures (1VHK,1MXI,1IPA,1K3R) that have methyltransferase activity [[cite:PUB00016836]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006364
Biological process RRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
Subterm of
Part of
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
Lj0g3v0191559.1
– Methyltransferases isoform 1 [Theobroma cacao] gi|508781919|gb|EOY29175.1|
Domains
9
Lj0g3v0191559.2
– Methyltransferases isoform 1 [Theobroma cacao] gi|508781919|gb|EOY29175.1|
Domains
9
LotjaGi5g1v0064600.2
– Ribosomal RNA large subunit methyltransferase H; TAIR: AT5G10620.1 methyltransferase; Swiss-Prot: sp|Q9LXB4|Y5620_ARATH Putative RNA methyltransferase At5g10620; TrEMBL-Plants: tr|I3SEK8|I3SEK8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0064600
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd18081 CDD 1 33.33