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IPR007474 is a ApaG domain.
<p>The apaG domain is a ~125 amino acids domain present in bacterial apaG proteins and in eukaryotic F-box proteins. The domain is named after the bacterial apaG protein, of which it forms the core. The domain also occurs in the C-terminal part of eukaryotic proteins with an N-terminal F-box domain. The Salmonella typhimurium apaG domain protein corD is involved in Co(2+) resistance and Mg(2+) efflux. Tertiary structures from different apaG proteins show a fold of several β-sheets. The apaG domain may be involved in protein-protein interactions which could be implicated in substrate-specificity [[cite:PUB00009972], [cite:PUB00016988], [cite:PUB00018539], [cite:PUB00016989]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | F-box protein SKIP16 [Medicago truncatula] gi|357473077|ref|XP_003606823.1| | 13 | ||
| – | Expressed protein [Oryza sativa Japonica Group] gi|62733972|gb|AAX96081.1| | 13 | ||
| – | PREDICTED: protein ApaG-like isoform X1 [Cicer arietinum] gi|502152325|ref|XP_004508873.1| | 12 | ||
| – | Protein ApaG; TAIR: AT1G06110.1 SKP1/ASK-interacting protein 16; Swiss-Prot: sp|B0UC46|APAG_METS4 Protein ApaG; TrEMBL-Plants: tr|I1JX82|I1JX82_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0179100 | 12 | ||
| – | Protein ApaG; TAIR: AT1G06110.1 SKP1/ASK-interacting protein 16; Swiss-Prot: sp|Q9LND7|SKI16_ARATH F-box protein SKIP16; TrEMBL-Plants: tr|I3SQI7|I3SQI7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0500000 | 14 | ||
| – | Protein apaG; TAIR: AT1G06110.1 SKP1/ASK-interacting protein 16; Swiss-Prot: sp|Q8UI68|APAG_AGRFC Protein ApaG; TrEMBL-Plants: tr|A0A151RPX9|A0A151RPX9_CAJCA Protein apaG; Found in the gene: LotjaGi4g1v0232400 | 12 | ||
| – | Protein apaG; TAIR: AT1G06110.1 SKP1/ASK-interacting protein 16; Swiss-Prot: sp|Q8UI68|APAG_AGRFC Protein ApaG; TrEMBL-Plants: tr|A0A151RPX9|A0A151RPX9_CAJCA Protein apaG; Found in the gene: LotjaGi4g1v0232400 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF46600 | SUPERFAMILY | 1 | 14.29 |