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IPR009646

Source: InterPro

Description

IPR009646 is a Root cap.

<p>The cells at the periphery of the root cap are continuously sloughed off from the root into the mucilage, and are thought to be programmed to die [[cite:PUB00012852]].This family represents a conserved region approximately 60 residues in length within plant root cap proteins, which may be involved in the process.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 16

Transcript Name Description Predicted domains Domain count
Lj0g3v0346569.1
– Late embryogenesis abundant (LEA) protein-related [Theobroma cacao] gi|508720930|gb|EOY12827.1|
Domains
11
Lj3g3v0669220.2
– Late embryogenesis abundant (LEA) protein-related [Theobroma cacao] gi|508720930|gb|EOY12827.1|
Domains
12
Lj3g3v3086010.1
– Late embryogenesis abundant (LEA) protein-related [Theobroma cacao] gi|508785783|gb|EOY33039.1|
Domains
14
Lj3g3v3086010.2
– Late embryogenesis abundant (LEA) protein-related [Theobroma cacao] gi|508785783|gb|EOY33039.1|
Domains
14
Lj3g3v3086010.3
– Late embryogenesis abundant (LEA) protein-related [Theobroma cacao] gi|508785783|gb|EOY33039.1|
Domains
14
Lj6g3v1629660.1
– Late embryogenesis abundant protein-like protein [Arabidopsis thaliana] gi|30685319|ref|NP_188574.2|
Domains
13
Lj6g3v1629670.1
– Late embryogenesis abundant protein-like protein [Arabidopsis thaliana] gi|30685319|ref|NP_188574.2|
Domains
4
Lj6g3v1629690.1
– Late embryogenesis abundant protein-like protein [Arabidopsis thaliana] gi|30685319|ref|NP_188574.2|
Domains
13
LotjaGi2g1v0360900.1
– Late embryogenesis abundant (LEA) protein-related; TAIR: AT5G60520.1 Late embryogenesis abundant (LEA) protein-like protein; Swiss-Prot: sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr|I3S0K3|I3S0K3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0360900
Domains
13
LotjaGi2g1v0360900.2
– Late embryogenesis abundant (LEA) protein-related; TAIR: AT5G60520.1 Late embryogenesis abundant (LEA) protein-like protein; Swiss-Prot: sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr|I3S0K3|I3S0K3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0360900
Domains
13
LotjaGi2g1v0360900.3
– Late embryogenesis abundant (LEA) protein-related; TAIR: AT5G60520.1 Late embryogenesis abundant (LEA) protein-like protein; Swiss-Prot: sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr|I3S0K3|I3S0K3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0360900
Domains
13
LotjaGi3g1v0077900.1
– Late embryogenesis abundant protein-related; TAIR: AT5G54370.1 Late embryogenesis abundant (LEA) protein-like protein; Swiss-Prot: sp|P19899|CAPSD_MNSV Capsid protein; TrEMBL-Plants: tr|I3SIK9|I3SIK9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0077900
Domains
11
LotjaGi3g1v0078100.1
– Late embryogenesis abundant protein-related; TAIR: AT5G54370.1 Late embryogenesis abundant (LEA) protein-like protein; Swiss-Prot: sp|Q03647|MEL_SACCA Alpha-galactosidase; TrEMBL-Plants: tr|I3SIK9|I3SIK9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0078100
Domains
12
LotjaGi3g1v0321700.1
– Late embryogenesis abundant protein-related; TAIR: AT5G54370.1 Late embryogenesis abundant (LEA) protein-like protein; Swiss-Prot: sp|Q6G465|RPOZ_BARHE DNA-directed RNA polymerase subunit omega; TrEMBL-Plants: tr|I3SAD4|I3SAD4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0321700
Domains
11
LotjaGi6g1v0268500.1
– Late embryogenesis abundant protein; TAIR: AT3G19430.2 late embryogenesis abundant protein-related / LEA protein-like protein; Swiss-Prot: sp|Q8N8U9|BMPER_HUMAN BMP-binding endothelial regulator protein; TrEMBL-Plants: tr|A0A072V5G0|A0A072V5G0_MEDTR Late embryogenesis abundant (LEA)-like protein; Found in the gene: LotjaGi6g1v0268500
Domains
12
LotjaGi6g1v0268800.1
– Late embryogenesis abundant protein; TAIR: AT3G19430.2 late embryogenesis abundant protein-related / LEA protein-like protein; Swiss-Prot: sp|Q8N8U9|BMPER_HUMAN BMP-binding endothelial regulator protein; TrEMBL-Plants: tr|A0A072V5G0|A0A072V5G0_MEDTR Late embryogenesis abundant (LEA)-like protein; Found in the gene: LotjaGi6g1v0268800
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TMhelix TMHMM 1 6.25