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IPR038630 is a Ribosomal protein L24e/L24 superfamily.
<p>Ribosomal protein eL24/L24 is a ribosomal protein found in eukaryotes (L24) and in archaea (eL24, distinct from archaeal L24). eL24/L24 is located on the surface of the large subunit, adjacent to proteins L14 and L3, and near the translation factor binding site. eL24/L24 appears to play a role in the kinetics of peptide synthesis, and may be involved in interactions between the large and small subunits, either directly or through other factors. In mouse, a deletion mutation in L24 has been identified as the cause for the belly spot and tail (Bst) mutation that results in disrupted pigmentation, somitogenesis and retinal cell fate determination [[cite:PUB00080482]]. L24 may be an important protein in eukaryotic reproduction: in shrimp, L24 expression is elevated in the ovary, suggesting a role in oogenesis [[cite:PUB00080483]], and in Arabidopsis, L24 has been proposed to have a specific function in gynoecium development [[cite:PUB00080484]].</p> <p>The crystal structure of the eL24 protein from Halobacterium marismortui (Haloarcula marismortui) has been determined [[cite:PUB00054250], [cite:PUB00028498]]. The protein is composed of a single structural domain which forms an α/β zinc-binding fold.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 | 13 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 | 13 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 | 13 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175800 | 13 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175800 | 13 | ||
| – | 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SVC9|I3SVC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0412900 | 14 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC | 8 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC | 8 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC | 8 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC | 8 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC | 8 | ||
| – | 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SS30|I3SS30_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0419200 | 15 | ||
| – | 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SS30|I3SS30_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0419200 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 7.69 |