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IPR011254 is a Prismane-like superfamily.
<p>Prismane (hybrid-cluster) proteins are present in a wide range of bacteria and archaea, and are characterised by their two Fe/S centres: a [4Fe-4S] cubane cluster, and a hybrid [4Fe-2S-2O] cluster [[cite:PUB00007375]]. Prismane proteins contain four domains: two spectrin repeat-like 3-helical bundle domains, and two α/β domains with Rossmann-fold topology. Several proteins are structurally related to Prismane, including Ni-containing carbon monoxide dehydrogenase (CODH) (lack one of the N-terminal 3-helical bundle domains), the alpha and beta subunits of bifunctional CODH, and the alpha and beta subunits of acetyl-CoA synthetase.</p> <p>This superfamily represents the spectrin repeat-like 3-helical bundle domains, as well as the two α/β domains with Rossmann-fold topology.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: kinesin-like calmodulin-binding protein homolog [Glycine max] gi|356531307|ref|XP_003534219.1| | 28 | ||
| – | PREDICTED: kinesin-like calmodulin-binding protein homolog [Glycine max] gi|356540898|ref|XP_003538921.1| | 27 | ||
| – | PREDICTED: kinesin-like calmodulin-binding protein homolog [Cicer arietinum] gi|502161841|ref|XP_004512302.1| | 18 | ||
| – | Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|I1J891|I1J891_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0351000 | 44 | ||
| – | Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|I1J891|I1J891_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0351000 | 44 | ||
| – | Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|I1L4M5|I1L4M5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0141300 | 44 | ||
| – | Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|G7L7W2|G7L7W2_MEDTR Kinesin-like calmodulin-binding protein; Found in the gene: LotjaGi4g1v0141300 | 44 | ||
| – | 7-hydroxymethyl chlorophyll a reductase, chloroplastic; TAIR: AT1G04620.1 coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family; Swiss-Prot: sp|Q8GS60|HCAR_ARATH 7-hydroxymethyl chlorophyll a reductase, chloroplastic; TrEMBL-Plants: tr|I1LAL9|I1LAL9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0011300 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 12.50 |