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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1572000 |
| Transcript ID | Lj2g3v1572000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: kinesin-like calmodulin-binding protein homolog [Glycine max] gi|356540898|ref|XP_003538921.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 36 | 36 | – | – | |
| PANTHER | 7 | 66 | 60 | 8.80E-41 | ||
| PANTHER | 7 | 66 | 60 | 8.80E-41 | – | |
| SMART | 117 | 276 | 160 | 5.30E-33 | ||
| ProSiteProfiles | 117 | 276 | 160 | 51.226 | ||
| Pfam | 166 | 274 | 109 | 3.50E-24 | ||
| SMART | 277 | 501 | 225 | 1.50E-35 | ||
| ProSiteProfiles | 281 | 595 | 315 | 34.571 | ||
| Pfam | 285 | 358 | 74 | 1.60E-09 | ||
| SUPERFAMILY | 379 | 496 | 118 | 8.24E-19 | ||
| Pfam | 388 | 501 | 114 | 1.30E-15 | ||
| Gene3D | 394 | 495 | 102 | 2.00E-16 | ||
| CDD | 396 | 494 | 99 | 2.94E-15 | – | |
| CDD | 499 | 604 | 106 | 1.61E-71 | – | |
| SUPERFAMILY | 501 | 589 | 89 | 9.02E-13 | ||
| Gene3D | 501 | 587 | 87 | 1.70E-04 | ||
| Coils | 619 | 667 | 49 | – | – | |
| Coils | 734 | 775 | 42 | – | – | |
| Coils | 791 | 849 | 59 | – | – | |
| SUPERFAMILY | 834 | 886 | 53 | 8.24E-06 | ||
| PANTHER | 871 | 886 | 16 | 8.80E-41 | – | |
| PANTHER | 871 | 886 | 16 | 8.80E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Microtubule motor activity | Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP). | ||
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Cellular component | Cytoskeleton | Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. | ||
| Biological process | Microtubule-based movement | A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj2g3v1572000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1572000.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.