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IPR011430

Source: InterPro

Description

IPR011430 is a U3 small nucleolar RNA-associated protein 20, N-terminal.

<p>This entry represents a domain found towards the N-terminal of eukaryotic proteins including U3 small nucleolar RNA-associated protein 20 from yeast and the human homologue, also known as DRIM (Down-Regulated In Metastasis) ([swissprot:O75691]). DRIM is differentially expressed in metastatic and non-metastatic human breast carcinoma cells [[cite:PUB00014724]]. Proteins of this entry are involved in processing of non-coding RNA as components of the small-subunit (SSU) processome; SSU processome is involved in the biogenesis of the 18S rRNA [[cite:PUB00014725], [cite:PUB00101284]]. UTP20 is a huge α-solenoid that functions as a scaffold [[cite:PUB00101286], [cite:PUB00101285]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
Lj0g3v0327189.1
– PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine max] gi|356569238|ref|XP_003552811.1|
Domains
11
Lj0g3v0327189.2
– PREDICTED: small subunit processome component 20 homolog [Cicer arietinum] gi|502105173|ref|XP_004492742.1|
Domains
11
Lj0g3v0327189.3
– PREDICTED: small subunit processome component 20 homolog [Cicer arietinum] gi|502105173|ref|XP_004492742.1|
Domains
11
LotjaGi6g1v0039400.1
– Small subunit processome component 20 like; TAIR: AT4G30990.3 ARM repeat superfamily protein; Swiss-Prot: sp|O75691|UTP20_HUMAN Small subunit processome component 20 homolog; TrEMBL-Plants: tr|I1MYQ8|I1MYQ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0039400
Domains
8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 25.00