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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0327189 |
| Transcript ID | Lj0g3v0327189.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: small subunit processome component 20 homolog [Cicer arietinum] gi|502105173|ref|XP_004492742.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 760 | 760 | – | – | |
| PANTHER | 3 | 676 | 674 | 0 | – | |
| PANTHER | 3 | 676 | 674 | 0 | – | |
| Gene3D | 24 | 505 | 482 | 1.70E-07 | ||
| SUPERFAMILY | 91 | 345 | 255 | 1.89E-15 | ||
| SUPERFAMILY | 384 | 561 | 178 | 1.89E-15 | ||
| SUPERFAMILY | 634 | 679 | 46 | 1.89E-15 | ||
| PANTHER | 695 | 1059 | 365 | 0 | – | |
| PANTHER | 695 | 1059 | 365 | 0 | – | |
| SUPERFAMILY | 737 | 790 | 54 | 9.51E-37 | ||
| SUPERFAMILY | 743 | 799 | 57 | 1.89E-15 | ||
| Phobius | 761 | 782 | 22 | – | – | |
| Phobius | 783 | 1027 | 245 | – | – | |
| SUPERFAMILY | 827 | 965 | 139 | 9.51E-37 | ||
| Pfam | 892 | 1551 | 660 | 3.50E-93 | ||
| Phobius | 1028 | 1049 | 22 | – | – | |
| Phobius | 1050 | 2015 | 966 | – | – | |
| PANTHER | 1075 | 1143 | 69 | 0 | – | |
| PANTHER | 1075 | 1143 | 69 | 0 | – | |
| PANTHER | 1161 | 1511 | 351 | 0 | – | |
| PANTHER | 1161 | 1511 | 351 | 0 | – | |
| SUPERFAMILY | 1337 | 1429 | 93 | 3.65E-10 | ||
| SUPERFAMILY | 1499 | 1888 | 390 | 3.65E-10 | ||
| PANTHER | 1529 | 2706 | 1178 | 0 | – | |
| PANTHER | 1529 | 2706 | 1178 | 0 | – | |
| Gene3D | 1549 | 1969 | 421 | 3.90E-17 | ||
| SUPERFAMILY | 1648 | 1705 | 58 | 9.51E-37 | ||
| SUPERFAMILY | 1755 | 1841 | 87 | 9.51E-37 | ||
| SUPERFAMILY | 1918 | 1965 | 48 | 9.51E-37 | ||
| Gene3D | 2010 | 2421 | 412 | 3.90E-17 | ||
| Phobius | 2016 | 2035 | 20 | – | – | |
| SUPERFAMILY | 2026 | 2432 | 407 | 9.51E-37 | ||
| Phobius | 2036 | 2707 | 672 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0327189.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0327189.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.