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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0327189 |
| Transcript ID | Lj0g3v0327189.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: small subunit processome component 20 homolog [Cicer arietinum] gi|502105173|ref|XP_004492742.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 759 | 759 | – | – | |
| PANTHER | 3 | 675 | 673 | 0 | – | |
| PANTHER | 3 | 675 | 673 | 0 | – | |
| Gene3D | 24 | 318 | 295 | 7.00E-08 | ||
| SUPERFAMILY | 91 | 273 | 183 | 4.16E-20 | ||
| SUPERFAMILY | 377 | 549 | 173 | 4.16E-20 | ||
| Gene3D | 417 | 573 | 157 | 7.00E-08 | ||
| SUPERFAMILY | 627 | 802 | 176 | 4.16E-20 | ||
| Gene3D | 635 | 661 | 27 | 7.00E-08 | ||
| PANTHER | 694 | 1058 | 365 | 0 | – | |
| PANTHER | 694 | 1058 | 365 | 0 | – | |
| Gene3D | 724 | 880 | 157 | 7.00E-08 | ||
| SUPERFAMILY | 737 | 806 | 70 | 5.24E-09 | ||
| Phobius | 760 | 781 | 22 | – | – | |
| Phobius | 782 | 1026 | 245 | – | – | |
| SUPERFAMILY | 832 | 974 | 143 | 4.16E-20 | ||
| SUPERFAMILY | 848 | 955 | 108 | 5.24E-09 | ||
| Pfam | 891 | 1550 | 660 | 3.50E-93 | ||
| SUPERFAMILY | 983 | 1031 | 49 | 5.24E-09 | ||
| Phobius | 1027 | 1048 | 22 | – | – | |
| Phobius | 1049 | 2014 | 966 | – | – | |
| PANTHER | 1074 | 1142 | 69 | 0 | – | |
| PANTHER | 1074 | 1142 | 69 | 0 | – | |
| SUPERFAMILY | 1080 | 1137 | 58 | 5.24E-09 | ||
| PANTHER | 1160 | 1510 | 351 | 0 | – | |
| PANTHER | 1160 | 1510 | 351 | 0 | – | |
| SUPERFAMILY | 1182 | 1428 | 247 | 5.24E-09 | ||
| PANTHER | 1528 | 2705 | 1178 | 0 | – | |
| PANTHER | 1528 | 2705 | 1178 | 0 | – | |
| SUPERFAMILY | 1552 | 1704 | 153 | 2.59E-40 | ||
| Gene3D | 1750 | 1966 | 217 | 5.90E-08 | ||
| SUPERFAMILY | 1754 | 1840 | 87 | 2.59E-40 | ||
| SUPERFAMILY | 1917 | 1964 | 48 | 2.59E-40 | ||
| Phobius | 2015 | 2034 | 20 | – | – | |
| SUPERFAMILY | 2025 | 2431 | 407 | 2.59E-40 | ||
| Phobius | 2035 | 2706 | 672 | – | – | |
| Gene3D | 2160 | 2445 | 286 | 1.50E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0327189.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0327189.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.