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IPR018152 is a Superoxide dismutase, copper/zinc, binding site.
<p>Copper/Zinc superoxide dismutase (SODC) [[cite:PUB00001002], [cite:PUB00026910], [cite:PUB00004789]] is one of the three forms of an enzyme that catalyzes the dismutation of superoxide radicals. SODC binds one atom each of zinc and copper. Various forms of SODC are known: a cytoplasmic form in eukaryotes, an additional chloroplast form in plants, an extracellular form in some eukaryotes, and a periplasmic form in prokaryotes. The metal binding sites are conserved in all the known SODC sequences [[cite:PUB00044787]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Superoxide dismutase activity | Catalysis of the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Superoxide dismutase [Medicago truncatula] gi|357497317|ref|XP_003618947.1| | 12 | ||
| – | Cytosolic CuZn-superoxide dismutase [Lotus japonicus] gi|32441511|gb|AAP81872.1| | 11 | ||
| – | Superoxide dismutase [Cu]-Zn]; TAIR: AT1G08830.1 copper/zinc superoxide dismutase 1; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|Q56VR6|Q56VR6_LOTJA Superoxide dismutase [Cu]-Zn]; Found in the gene: LotjaGi1g1v0777100 | 13 | ||
| – | Superoxide dismutase [Cu]-Zn]; TAIR: AT5G18100.1 copper/zinc superoxide dismutase 3; Swiss-Prot: sp|O49044|SODC2_MESCR Superoxide dismutase [Cu]-Zn] 2; TrEMBL-Plants: tr|I3SMT5|I3SMT5_LOTJA Superoxide dismutase [Cu]-Zn]; Found in the gene: LotjaGi2g1v0106900_LC | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00305 | CDD | 1 | 25.00 |