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G3DSA:2.60.40.200

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006801
Biological process Superoxide metabolic process The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.
Subterm of
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

Associated Lotus transcripts 17

Transcript Name Description Predicted domains Domain count
Lj0g3v0070429.1
– Superoxide dismutase [Medicago truncatula] gi|357497317|ref|XP_003618947.1|
Domains
12
Lj0g3v0080529.1
– Cu/Zn-superoxide dismutase copper chaperone [Glycine max] gi|351722110|ref|NP_001235441.1|
Domains
21
Lj0g3v0343039.2
– Cytosolic CuZn-superoxide dismutase [Lotus japonicus] gi|32441511|gb|AAP81872.1|
Domains
3
Lj0g3v0343039.3
–
Domains
4
Lj1g3v0318300.1
– PREDICTED: superoxide dismutase [Cu]-Zn] gi|470102209|ref|XP_004287550.1|
Domains
8
Lj1g3v4955350.1
– Cytosolic CuZn-superoxide dismutase [Lotus japonicus] gi|32441511|gb|AAP81872.1|
Domains
11
LotjaGi1g1v0417000_LC.1
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|G7KDK7|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC
Domains
8
LotjaGi1g1v0417000_LC.2
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|G7KDK7|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC
Domains
8
LotjaGi1g1v0417000_LC.3
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G08830.1 copper/zinc superoxide dismutase 1; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|A0A0S3S5A5|A0A0S3S5A5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0417000_LC
Domains
6
LotjaGi1g1v0417000_LC.4
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|G7KDK7|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC
Domains
8
LotjaGi1g1v0417000_LC.5
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|G7KDK7|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC
Domains
8
LotjaGi1g1v0417000_LC.6
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|G7KDK7|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC
Domains
8
LotjaGi1g1v0417000_LC.7
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|G7KDK7|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC
Domains
8
LotjaGi1g1v0417000_LC.8
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G08830.1 copper/zinc superoxide dismutase 1; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|A0A0S3S5A5|A0A0S3S5A5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0417000_LC
Domains
6
LotjaGi1g1v0777100.1
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G08830.1 copper/zinc superoxide dismutase 1; Swiss-Prot: sp|Q9SQL5|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr|Q56VR6|Q56VR6_LOTJA Superoxide dismutase [Cu]-Zn]; Found in the gene: LotjaGi1g1v0777100
Domains
13
LotjaGi2g1v0106900_LC.1
– Superoxide dismutase [Cu]-Zn]; TAIR: AT5G18100.1 copper/zinc superoxide dismutase 3; Swiss-Prot: sp|O49044|SODC2_MESCR Superoxide dismutase [Cu]-Zn] 2; TrEMBL-Plants: tr|I3SMT5|I3SMT5_LOTJA Superoxide dismutase [Cu]-Zn]; Found in the gene: LotjaGi2g1v0106900_LC
Domains
13
LotjaGi4g1v0210500.1
– Superoxide dismutase [Cu]-Zn]; TAIR: AT1G12520.1 copper chaperone for SOD1; Swiss-Prot: sp|Q9LD47|CCS_ARATH Copper chaperone for superoxide dismutase, chloroplastic/cytosolic; TrEMBL-Plants: tr|I3SA50|I3SA50_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0210500
Domains
22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00371 CDD 1 5.88