Domain Predictions — View

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PTHR10003

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0070429.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Medicago truncatula] gi\|357497317\|ref\|XP_003618947.1\|	Domains G3DSA:2.60.40.200 IPR001424 IPR018152 IPR024134 PF00080 PR00068 PS00087 PS00332 PTHR10003 PTHR10003:SF31 SSF49329 cd00305	12
Lj0g3v0080529.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cu/Zn-superoxide dismutase copper chaperone [Glycine max] gi\|351722110\|ref\|NP_001235441.1\|	Domains G3DSA:2.60.40.200 G3DSA:3.30.70.100 IPR001424 IPR006121 IPR024134 IPR024142 NON_CYTOPLASMIC_DOMAIN PF00080 PF00403 PS50846 PTHR10003 PTHR10003:SF27 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49329 SSF55008 SignalP-TM_GRAM_POSITIVE SignalP-noTM_GRAM_NEGATIVE cd00371	21
Lj1g3v0318300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: superoxide dismutase [Cu]-Zn] gi\|470102209\|ref\|XP_004287550.1\|	Domains G3DSA:2.60.40.200 IPR001424 IPR024134 IPR031074 PF00080 PTHR10003 PTHR10003:SF34 SSF49329	8
Lj1g3v4955350.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytosolic CuZn-superoxide dismutase [Lotus japonicus] gi\|32441511\|gb\|AAP81872.1\|	Domains G3DSA:2.60.40.200 IPR001424 IPR018152 IPR024134 PF00080 PR00068 PS00087 PS00332 PTHR10003 SSF49329 cd00305	11
LotjaGi1g1v0417000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp\|Q9SQL5\|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr\|G7KDK7\|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC	Domains G3DSA:2.60.40.200 IPR024134 IPR035370 IPR036423 PF17406 PTHR10003 PTHR10003:SF68 SSF49329	8
LotjaGi1g1v0417000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp\|Q9SQL5\|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr\|G7KDK7\|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC	Domains G3DSA:2.60.40.200 IPR024134 IPR035370 IPR036423 PF17406 PTHR10003 PTHR10003:SF68 SSF49329	8
LotjaGi1g1v0417000_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G08830.1 copper/zinc superoxide dismutase 1; Swiss-Prot: sp\|Q9SQL5\|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr\|A0A0S3S5A5\|A0A0S3S5A5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0417000_LC	Domains G3DSA:2.60.40.200 IPR024134 IPR036423 PTHR10003 PTHR10003:SF68 SSF49329	6
LotjaGi1g1v0417000_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp\|Q9SQL5\|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr\|G7KDK7\|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC	Domains G3DSA:2.60.40.200 IPR024134 IPR035370 IPR036423 PF17406 PTHR10003 PTHR10003:SF68 SSF49329	8
LotjaGi1g1v0417000_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp\|Q9SQL5\|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr\|G7KDK7\|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC	Domains G3DSA:2.60.40.200 IPR024134 IPR035370 IPR036423 PF17406 PTHR10003 PTHR10003:SF68 SSF49329	8
LotjaGi1g1v0417000_LC.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp\|Q9SQL5\|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr\|G7KDK7\|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC	Domains G3DSA:2.60.40.200 IPR024134 IPR035370 IPR036423 PF17406 PTHR10003 PTHR10003:SF68 SSF49329	8
LotjaGi1g1v0417000_LC.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp\|Q9SQL5\|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr\|G7KDK7\|G7KDK7_MEDTR Nucleolar RNA-associated protein, putative; Found in the gene: LotjaGi1g1v0417000_LC	Domains G3DSA:2.60.40.200 IPR024134 IPR035370 IPR036423 PF17406 PTHR10003 PTHR10003:SF68 SSF49329	8
LotjaGi1g1v0417000_LC.8 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G08830.1 copper/zinc superoxide dismutase 1; Swiss-Prot: sp\|Q9SQL5\|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr\|A0A0S3S5A5\|A0A0S3S5A5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0417000_LC	Domains G3DSA:2.60.40.200 IPR024134 IPR036423 PTHR10003 PTHR10003:SF68 SSF49329	6
LotjaGi1g1v0777100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G08830.1 copper/zinc superoxide dismutase 1; Swiss-Prot: sp\|Q9SQL5\|SODC_ANACO Superoxide dismutase [Cu]-Zn]; TrEMBL-Plants: tr\|Q56VR6\|Q56VR6_LOTJA Superoxide dismutase [Cu]-Zn]; Found in the gene: LotjaGi1g1v0777100	Domains G3DSA:2.60.40.200 IPR001424 IPR018152 IPR024134 IPR036423 PF00080 PR00068 PS00087 PS00332 PTHR10003 PTHR10003:SF68 SSF49329 cd00305	13
LotjaGi2g1v0106900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT5G18100.1 copper/zinc superoxide dismutase 3; Swiss-Prot: sp\|O49044\|SODC2_MESCR Superoxide dismutase [Cu]-Zn] 2; TrEMBL-Plants: tr\|I3SMT5\|I3SMT5_LOTJA Superoxide dismutase [Cu]-Zn]; Found in the gene: LotjaGi2g1v0106900_LC	Domains G3DSA:2.60.40.200 IPR001424 IPR018152 IPR024134 IPR036423 PF00080 PR00068 PS00087 PS00332 PTHR10003 PTHR10003:SF31 SSF49329 cd00305	13
LotjaGi4g1v0210500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Superoxide dismutase [Cu]-Zn]; TAIR: AT1G12520.1 copper chaperone for SOD1; Swiss-Prot: sp\|Q9LD47\|CCS_ARATH Copper chaperone for superoxide dismutase, chloroplastic/cytosolic; TrEMBL-Plants: tr\|I3SA50\|I3SA50_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0210500	Domains G3DSA:2.60.40.200 G3DSA:3.30.70.100 IPR001424 IPR006121 IPR024134 IPR036163 IPR036423 NON_CYTOPLASMIC_DOMAIN PF00080 PF00403 PS50846 PTHR10003 PTHR10003:SF27 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49329 SSF55008 SignalP-TM SignalP-noTM cd00371	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00371	CDD	1	6.67