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IPR019514

Source: InterPro

Description

IPR019514 is a Syndetin, C-terminal.

<p>The function of this domain is not known, but it is found at the C terminus of syndetin (VPS50), a unique component of the endosome-associated retrograde protein (EARP) complex. The EARP complex otherwise shares four of its five subunits with the Golgi-associated retrograde protein (GARP) complex. The EARP complex is localized to recycling endosomes where it acts as a tethering complex for recycling of plasma membrane receptors [[cite:PUB00077150]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Lj3g3v3026760.1
– PREDICTED: coiled-coil domain-containing protein 132-like [Glycine max] gi|356542692|ref|XP_003539800.1|
Domains
9
Lj3g3v3026760.2
– PREDICTED: coiled-coil domain-containing protein 132-like [Glycine max] gi|356542692|ref|XP_003539800.1|
Domains
9
Lj3g3v3026760.5
– PREDICTED: coiled-coil domain-containing protein 132-like [Glycine max] gi|356542692|ref|XP_003539800.1|
Domains
9
LotjaGi3g1v0482400.1
– Coiled-coil domain-containing protein 132; TAIR: AT2G27900.1 coiled-coil protein; Swiss-Prot: sp|Q5ZKV9|VPS50_CHICK Syndetin; TrEMBL-Plants: tr|I1LRA9|I1LRA9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0482400
Domains
10
LotjaGi3g1v0482400.2
– Coiled-coil domain-containing protein 132; TAIR: AT2G27900.1 coiled-coil protein; Swiss-Prot: sp|Q5ZKV9|VPS50_CHICK Syndetin; TrEMBL-Plants: tr|I1LRA9|I1LRA9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0482400
Domains
15
LotjaGi3g1v0482400.3
– Coiled-coil domain-containing protein 132; TAIR: AT2G27900.1 coiled-coil protein; Swiss-Prot: sp|Q5ZKV9|VPS50_CHICK Syndetin; TrEMBL-Plants: tr|I1LRA9|I1LRA9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0482400
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67