Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR019595 is a Domain of unknown function DUF2470.
<p>This entry represents an uncharacterised domain that can be found in a group of putative haem-iron utilisation proteins, such as HugZ from H. pylori and non-canonical heme oxygenase HOZ form Arabidopsis. HOZ is a dimeric β-barrel protein that binds to heme and catalyses its degradation to produce biliverdin [[cite:PUB00155388]]. This domain can also be found in C-terminal of the glutamyl-tRNA reductase-binding (GluTRBP) protein from Arabidopsis [[cite:PUB00075508]]. GluTRBP is involved in the regulation of glutamyl-tRNA reductase (GluTR) which is important for the synthesis and distribution of 5-aminolevulinate, a precursor in heme and chlorophyll biosynthesis [[cite:PUB00075509]]. GluTRBP is necessary for efficient photosynthetic electron transport in chloroplasts [[cite:PUB00075510]].</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Pentatricopeptide repeat-containing protein-like protein [Arabidopsis thaliana] gi|334187889|ref|NP_001190376.1| | 7 | ||
– | Root border cell-specific protein [Pisum sativum] gi|7381225|gb|AAF61443.1|AF139187_1 | 15 | ||
– | Root border cell-specific protein [Pisum sativum] gi|7381225|gb|AAF61443.1|AF139187_1 | 15 | ||
– | Pentatricopeptide repeat (PPR) superfamily protein isoform 2 [Theobroma cacao] gi|508713060|gb|EOY04957.1| | 12 | ||
– | FMN binding; TAIR: AT3G03890.1 FMN binding protein; Swiss-Prot: sp|Q9LU39|GLUBP_ARATH Glutamyl-tRNA reductase-binding protein, chloroplastic; TrEMBL-Plants: tr|Q9M7D2|Q9M7D2_PEA Root border cell-specific protein; Found in the gene: LotjaGi1g1v0643200 | 16 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
SignalP-TM | SignalP_GRAM_NEGATIVE | 1 | 20.00 |