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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0643200 |
| Transcript ID | LotjaGi1g1v0643200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | FMN binding; TAIR: AT3G03890.1 FMN binding protein; Swiss-Prot: sp|Q9LU39|GLUBP_ARATH Glutamyl-tRNA reductase-binding protein, chloroplastic; TrEMBL-Plants: tr|Q9M7D2|Q9M7D2_PEA Root border cell-specific protein; Found in the gene: LotjaGi1g1v0643200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120031517..120037012) extracted from Lotus japonicus Gifu genome v1.2.
AAACGAAGAATCTGGTTCAGCAGTTGTTGGCTGTTGGAGTACTCCACAAGATGAAGACCATGGTGACGCCATTGATGAGG ATCTCCCCATCTTTTCGCCAAAATGCCCATAAAGCCCTTCCCTTCTCTCCAACACGTCACTCTTCTTCACCAAACTCCTT CACCTTCATCTCCGCCATTCCCACTCTTTCCATTTCCATGGCCGCTTCTTCCCAATCCACCGCTCCGGTAACTCAATTTC TTCACTCTTCTCTTTTTTTCCCGTATTTTCTAACACCCAATTGAACAATAATCAGCTTGGTCGCTTCAAAATCTGAACTT GAACAAAAACAACTCGAAGCTACAATATAATTTTTTCTGTTCATGTTTTCATTTGCTGAATAATTTGAATTTAGAAGTGT TTTTCTTTCAGTGATAATCATAGCTAGTGAAGTAATGTTATGCTATTGCTTGTTTCTGAATCAGGCTGTGCCCTCTGGTG ATGTTGGCATGAAAAAAGATGAAGTTTTTCAATTAATTCAAGCGCATCAGGTATTTTTTCAGTTATCAATTCAATCTGTT ACTAGTGAACTTCAAAGTAGTTGAAATGTATATAATATATGCCTACGTTTCTGTGTATGCCTGTGTATTTTTTAGGAAGA TTGTTGTGTGTTAATGTATTGGGGTTGTTATGATAGGAAAAAGCTGCTAGACTTCCACCGGTTGAACAAGTTCGAACTGT CCTTGATCATAGCCTACGCGGGGTGCTCTCAACATTCTCTAAGGTTTCTGTTCATGTGATTTTCAGTACATATGTTTAGT TTTTTGTTTTCTTAGCCAATGTGGTAACAAGTTTAATGAGAGGAGAAATGTAATTTAATAAAAGGCATAACTTTAACTCG ATACAACACTGATAGCATATTGACCAATCAATGAGGCAAGGAGATATAGAAATTTCGCCTGTTTGGAAGTTCAGTTGTGG CCTTCTGTTCATGCCAGAAGGAACTGCAAACCCCCTTCCCAGAGCAATCAAATTGAAATCTGACTGTCCTTTATGTTAAT TTTTTAGGCATGAAATTTTTAGTATTTATTGACAACAAGTACCCCCTTCTAATCTGGTATTCTTTTGATTTTTGACATGT AGAAGTACGAGGGTTATCCATCAGGGTCTATGGTTGACTTCGCATGTGATGCAAATGGATGCCCAATATTAGCAGTGAGC GATTTGGCAGTTCATACCAAGGTTCCGTTTCTTCTTTTTTTCTGTATTCCAATTTTTTTCATATTGTTAGGAAATAATAA ATATATAGCAATTTAAAGATTACATTTGTTTCTGGTTGTAAATTGGCATTTTGAGCAGTAGGATTAGATGTTGAATTTGG TGTTTTGTGAACTGACTTGTATATGTAACCATCCAGCCCACTGCTGAATTTGGCTTGTACACGGCCTCAATTTCAGTTTC AAACCCTTTTTTTATGTTCTCAACCAGATCATGGTCATCTTAACAATGATAATTCATGAGAACATCATTTTTTATTGACA CCTACCCAATTCAATTTAAAGCTTACTTCCATTGGTTAAGAGTCTTGTTTTCTATACTTTTCAGGACTTAACTGCTAATC CTAAATGTTCATTGCTTGTGGCTAGAGATCCTGAAGATAGGACTGATTTAGTGATAACTTTACATGGTGATGCTGTCTCT GTAAGTTATGATCTTCTGTTCATTTCCCATTTATAGGATGTTTCATTTTGTGTTTTCATTTCTTTCTACTATTGCGTTTT GGATTACATAGTTATTGTGTTACAGATTCATTATATGAAGGTGGAAAAGTTTAACTCTATTCCTGAAATTTTATTCAGGT ACCTGAAAAAGATAAAGAAGCCGTTCGAGCTGCATATTTAGCAAGACATCCCAATGCATTTTGGGTAACTTTGTTCATCA TTCTTCCCTAGAGCTTGCACCTTTTCCTTCTTGTTGTTATAAAATTAACTGCTATAGAAAACTTCAAATATTGAAGGTTG ACTTTGGAGACTTCCAATTTGTTCGCATTAAACCAAAGACTGTACGATTTGTGTCAGGTGTTGCCACAGCTTTATTAGGA TCAGGAGGTTTGTTAACCTTGCCACTCTTGTGGGTGTAATTGGCTGTTAAATGTTAATGACAGGGTATGTTTGGATGGAC CCTTTTTTATGTTTTTACCCTAAATCCTAAATGAGGAATAAAATAAAAGATTATCATGTAAACTTCTTGTCATCTTCTAT TCAGTTATATAAAAATTTATAATTCTCCTAATTTAAAAATGAGAATGAATCCTCCCTACCCTTTCTCTCTAAACTTCTAC AATGAAACATACATTAGCACTCTGTCTATTAGAGATACCGACTGTGGGATTTTTAATATTCTAAATGTACTTGTATTATC TGTTGTCTGTTAAACTGTTTAACTGTCACATCTACATTTATCTTTTTTGCTATATGGATTGCAATCATGTGGGTATGATA ATTTTCTTCATCTTTTACGGCAGTAGATTTACAACTTATATGCATCAGTGTCAGGGTTTTTTAAAGTAAACCTAGGGTAG AAACAGTGGATTGAAGGATAAATACAGTTGGTAAGCGTGATTTGCAGGCAAGAGGGGGGGGGGGGGGTTAGAGTAAGCTT TTGTGCTGTTCGAATGCCATGAAGTGGGACAAAACTCTTCTAAAGTAATCTTGTCTCTAAAATGAGCAAGTAAAAGTGTA TCAACCCCAGAATCAAAACTAAACTACAGTACTGAGATCATTTTTTTATGACGAGTTTTTCTTGATTCTGGTGTGGTGCG TTCTGCATCCTATGGGAGAACAAGAACTGTGCCTTTCAAGTTTCAAGCCCGTGGCTTTGACTGAAACTTGTACTTGTTAT CTGGTTATAGGACAGGCATTGCAAAGAATATATAATAATACCTGCATTTTGAGGAGTAAATTTAATCTTTTGATAATTTT TTTATTTGATTTTTTTTAATTGATGCTTAATTGCTGATAATAATCCCTTGCCATCACAATTGGAACCTTCTGGAATGAGC AAGTATCATCTCTGGATGTCAAGTGACTTTCTTGTTTGTTTTGTATATTGTCTATTACAGCTTTTTATTATGCTTATGCT TTAACTTTGATGTCAGAGTTTGATGGAGATGAGTATAAATCTGCAAAAGTTGATCCAGTCGCTCAGTTTTCCAAGCCAGT GGCGGTAGCGATCTTAACCGACCACGTGTTCTACTATGTATTTTATAAGTCAGCTTATTTTGATTCTAATCTTAGTGTAA TTTGACAGTCTCATATGAACAAAGACCATGGTGAAGATACAAAAGTGATTGTGCAGCACTGGACCTCAGTTCCGGTATGT CATTTTAACCATTGTTAAGTATAAAATATCTTGTAACCATTGTAGAGTATAAATATCAACAAGAAAAGCTCTTCGATTAA TTGATTCAACTGTTAATAAGATGTAAAATTCCTTTGTTACGCCAGTGTGCAATATGATATCATAGTGTATGAGAGTAATG ATGATGACTTTTGCATTATCTTGTATATTACATTGATGTGTTATTAATCATATCAATGCTAGGGTGTTACAGCGCTGAAA AAGCCAATTAAAATAAAATCGTATGTTCTAGAAAAAATATACAGTCCCAAATTATTGTTTTTTCTTCCTCATGCTGTGGG AGGGGAAGAGGCTGATGATGTTGTCTACTAATTGATCATCTACAGGTGGACTTTGCTGACATACTAGATTTGGATTGTCT TGGTTTCAATGTTAAGGTATTTCCAGTATTGGAATATTAATTGTTATTCACTTTATTTCCAGTCCCTTTAGGCACTACTT TTTAAATAAAAAAAATCACCGGTAAATTGGTATTATGATATCAATAGTGTTGTTGGTCCTTTCAATAATCATTTCTCCTC TTTTGCAGTTATGAGCTTGAAATATGTACCTGCTTTTTAAGAAGAATTTTGTTTTTGTAGGCTGGTTATCAAGGAGATAC TTTCAAGCTCCGTGTACCTTTCCCTCGACGTGCAGAAGATAGAAAGTATGACTTCCTGTTTGATATAAACTCCCATATCC TGTAGACAATATCATATCCACTTTCATTAGATTAAATGTGCCATTTTATTCTCCGGGAAACTTAAGCAAATTTGTTCTGT GGTGTGAACTTTGATGAAAATAGTAGTGTTACTGTATTAGTCTACAATTGATACTGTTCAATTGATTAAATTTTATGCTG TTAAATATCAGATAAGTAACAACCTCCTCTGTTATCAGTTTCCTTTCTTTTATCATCATTTTAAGATGGGATTAATCATG TCCATGCCATGAACTCCTGCTGAATAACTGCGTCATCTGCTTCTTGATGCCATAGGCTTATGGGTTTCCTATAAGGAACA TATGTAAATATGCAGAATAACCTTTCCATGTTGGCTTAGTGTCTGTTTGCCAAAAACTGGAAATAAAAGAAATTTCTGTC CTAGGCAAAAACTGAGAAGCAGCTTGACCCTAACCTTCTCGGTTATGAATGCAATAACGAGGAGAAAGACAAAAAACAAA CAGGCTATTATTTTCTCCAGAAGAATTTATTTTTTTTATATTGTTTTTCGTGTAGGGATGTTAAGACTCTCATTGTTGAG ATGCTCCAAGCTGCCAGGCCTCAAGGTGATTGATTATTCCAGTGATCAAAGATGATAGGTGCTCATCCAAAACTCAACTA ATTCTTGAATTCAATTGTTGTACTTGCCACAAGTTTTGTTAAATTTTAGTTGTGTACTGCTTTTTGACCAAATTGCAATG TCTTTGGACTTGGGTTGCCTGGTTTTATAGTCAAAGGAGCCAATTAAGTCTTGGATTGTAATAAAGCTTGCAAAATGTCA AAAAAGTAGAGAAGGAGGAGACATTTAAAAGATGGTAGTGTACAAGTTCTTTCTGTTCTAATTTCTAACCCTTTTGTTTG AAATGCTGCAGCGCGCTCCACAAGTCATCCTTTGGAAGAGGACTAAATGTGTACCTAAAAAAGTAGGAAAGTAAATTTAG TTATATTTTGCAAAGATAAAGATGACAAGTCATATGGTTGACTTTGTATACTTTTTTTACATTGGGAATTTTCGTGGGGT GAAAACACTTGAAAATTCAGACACATGTGGTGTAGTAGCCTCTCAAAATTACAAGTGGTGTAGTAGCCTCTCAAAGACAC ATGTGGTTGACATTGTACATAAATGATTACTAGATCTTTCTGTGAGTTGTACTCTATTTGAGAGTTGAAACAGTTTATGA ATAATCCTTATATAAACAACATTTTAATTTTTTAATTTTTGGGTGCGTAGAACAATTAATTTGACATGTACAGTGGCTGG TTGTTGTGCCATTATCATATGCATACCACACCTCTGTTATATTTCATGAACGTTCTTTGTGACTTTATCACAAGTTGAAG AAAGAACAGTTGGAAACTATATTTGCACACAACTTTACCTTGGAGGGATAAGGAAG
CDS sequence (LotjaGi1g1v0643200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGACCATGGTGACGCCATTGATGAGGATCTCCCCATCTTTTCGCCAAAATGCCCATAAAGCCCTTCCCTTCTCTCC AACACGTCACTCTTCTTCACCAAACTCCTTCACCTTCATCTCCGCCATTCCCACTCTTTCCATTTCCATGGCCGCTTCTT CCCAATCCACCGCTCCGGCTGTGCCCTCTGGTGATGTTGGCATGAAAAAAGATGAAGTTTTTCAATTAATTCAAGCGCAT CAGGAAAAAGCTGCTAGACTTCCACCGGTTGAACAAGTTCGAACTGTCCTTGATCATAGCCTACGCGGGGTGCTCTCAAC ATTCTCTAAGAAGTACGAGGGTTATCCATCAGGGTCTATGGTTGACTTCGCATGTGATGCAAATGGATGCCCAATATTAG CAGTGAGCGATTTGGCAGTTCATACCAAGGACTTAACTGCTAATCCTAAATGTTCATTGCTTGTGGCTAGAGATCCTGAA GATAGGACTGATTTAGTGATAACTTTACATGGTGATGCTGTCTCTGTACCTGAAAAAGATAAAGAAGCCGTTCGAGCTGC ATATTTAGCAAGACATCCCAATGCATTTTGGGTTGACTTTGGAGACTTCCAATTTGTTCGCATTAAACCAAAGACTGTAC GATTTGTGTCAGGTGTTGCCACAGCTTTATTAGGATCAGGAGAGTTTGATGGAGATGAGTATAAATCTGCAAAAGTTGAT CCAGTCGCTCAGTTTTCCAAGCCAGTGGCGTCTCATATGAACAAAGACCATGGTGAAGATACAAAAGTGATTGTGCAGCA CTGGACCTCAGTTCCGGTGGACTTTGCTGACATACTAGATTTGGATTGTCTTGGTTTCAATGTTAAGGCTGGTTATCAAG GAGATACTTTCAAGCTCCGTGTACCTTTCCCTCGACGTGCAGAAGATAGAAAGGATGTTAAGACTCTCATTGTTGAGATG CTCCAAGCTGCCAGGCCTCAAGGTGATTGA
Protein sequence (LotjaGi1g1v0643200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTMVTPLMRISPSFRQNAHKALPFSPTRHSSSPNSFTFISAIPTLSISMAASSQSTAPAVPSGDVGMKKDEVFQLIQAH QEKAARLPPVEQVRTVLDHSLRGVLSTFSKKYEGYPSGSMVDFACDANGCPILAVSDLAVHTKDLTANPKCSLLVARDPE DRTDLVITLHGDAVSVPEKDKEAVRAAYLARHPNAFWVDFGDFQFVRIKPKTVRFVSGVATALLGSGEFDGDEYKSAKVD PVAQFSKPVASHMNKDHGEDTKVIVQHWTSVPVDFADILDLDCLGFNVKAGYQGDTFKLRVPFPRRAEDRKDVKTLIVEM LQAARPQGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 60 | 60 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 51 | 51 | - | – | |
| Phobius | 1 | 36 | 36 | - | – | |
| PANTHER | 25 | 327 | 303 | 7.1E-200 | – | |
| PANTHER | 25 | 327 | 303 | 7.1E-200 | – | |
| Phobius | 37 | 48 | 12 | - | – | |
| Phobius | 49 | 60 | 12 | - | – | |
| Phobius | 61 | 329 | 269 | - | – | |
| Gene3D | 68 | 223 | 156 | 6.8E-38 | ||
| SUPERFAMILY | 91 | 325 | 235 | 5.7E-44 | – | |
| Pfam | 92 | 218 | 127 | 3.7E-14 | – | |
| Gene3D | 239 | 328 | 90 | 4.8E-22 | ||
| Pfam | 247 | 320 | 74 | 1.4E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cofactor binding | Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate. |
Expression pattern of LotjaGi1g1v0643200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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