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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3975170 |
| Transcript ID | Lj1g3v3975170.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | root border cell-specific protein [Pisum sativum] gi|7381225|gb|AAF61443.1|AF139187_1 |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 60 | 60 | – | – | |
| SignalP | 1 | 51 | 51 | – | – | |
| PANTHER | 1 | 313 | 313 | 1.70E-119 | – | |
| Phobius | 1 | 36 | 36 | – | – | |
| PANTHER | 1 | 313 | 313 | 1.70E-119 | – | |
| Phobius | 37 | 48 | 12 | – | – | |
| Phobius | 49 | 60 | 12 | – | – | |
| Phobius | 61 | 317 | 257 | – | – | |
| Gene3D | 78 | 223 | 146 | 5.60E-47 | ||
| SUPERFAMILY | 78 | 313 | 236 | 9.51E-44 | ||
| Pfam | 81 | 205 | 125 | 2.80E-14 | – | |
| Gene3D | 227 | 314 | 88 | 5.20E-18 | ||
| Pfam | 234 | 308 | 75 | 6.80E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cofactor binding | Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate. |
Expression pattern of Lj1g3v3975170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3975170.1, powered by CORGI.
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