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IPR022192

Source: InterPro

Description

IPR022192 is a Mitochondrial degradasome RNA helicase subunit, C-terminal domain.

<p>This domain is found in ATP-dependent RNA helicase SUV3. It is found in bacterial and eukaryotic proteins, it is approximately 50 amino acids in length and it is usually found in association with [pfam:PF00271].</p> <p>The yeast mitochondrial degradosome (mtEXO) is an NTP-dependent exoribonuclease involved in mitochondrial RNA metabolism. mtEXO is made up of two subunits: an RNase (DSS1) and an RNA helicase (SUV3). These co-purify with mitochondrial ribosomes [[cite:PUB00056881]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016817
Molecular function Hydrolase activity, acting on acid anhydrides Catalysis of the hydrolysis of any acid anhydride.
Subterm of

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
Lj1g3v0114230.1
– PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Glycine max] gi|356538244|ref|XP_003537614.1|
Domains
13
Lj2g3v1058030.1
– PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Cicer arietinum] gi|502090935|ref|XP_004489388.1|
Domains
16
LotjaGi2g1v0259000.1
– ATP-dependent RNA helicase; TAIR: AT5G39840.1 ATP-dependent RNA helicase; Swiss-Prot: sp|F4KFV7|SUV3L_ARATH DExH-box ATP-dependent RNA helicase DExH18, mitochondrial; TrEMBL-Plants: tr|A0A1J7FQS0|A0A1J7FQS0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0259000
Domains
20
LotjaGi2g1v0453500.1
– ATP-dependent RNA helicase; TAIR: AT4G14790.1 ATP-dependent RNA helicase; Swiss-Prot: sp|Q9SMX1|SUV3M_ARATH DExH-box ATP-dependent RNA helicase DExH16, mitochondrial; TrEMBL-Plants: tr|I1LFV4|I1LFV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0453500
Domains
19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd18805 CDD 1 25.00