Domain Predictions — View

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PTHR12131

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 22

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0114230.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Glycine max] gi\|356538244\|ref\|XP_003537614.1\|	Domains G3DSA:3.40.50.300 IPR001650 IPR022192 IPR027417 PF00271 PF12513 PS51194 PTHR12131 PTHR12131:SF2 SM00490 SSF52540 cd00046 cd00079	13
Lj1g3v0114230.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Glycine max] gi\|356538244\|ref\|XP_003537614.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.300 IPR001650 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00271 PS51194 PTHR12131 PTHR12131:SF2 SM00490 SSF52540 TRANSMEMBRANE cd00046 cd00079	14
Lj2g3v1058030.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Cicer arietinum] gi\|502090935\|ref\|XP_004489388.1\|	Domains G3DSA:3.40.50.300 IPR001650 IPR014001 IPR022192 IPR027417 PF00271 PF12513 PS51192 PS51194 PTHR12131 PTHR12131:SF1 SM00490 SSF52540 cd00046 cd00079 mobidb-lite	16
Lj4g3v3015040.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity 2-like 2-like [Glycine max] gi\|356513235\|ref\|XP_003525319.1\|	Domains Coil G3DSA:3.40.50.300 IPR001650 IPR012961 IPR025696 IPR027417 PF00271 PF08148 PF13234 PS51194 PTHR12131 PTHR12131:SF4 SM00490 SM01142 SSF52540 cd00079 cd13154 mobidb-lite	18
LotjaGi1g1v0188700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Activating signal cointegrator 1 complex subunit 3; TAIR: AT5G61140.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9FNQ1\|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14; TrEMBL-Plants: tr\|A0A151TRR1\|A0A151TRR1_CAJCA Activating signal cointegrator 1 complex subunit 3; Found in the gene: LotjaGi1g1v0188700_LC	Domains PTHR12131 PTHR12131:SF16	3
LotjaGi1g1v0188900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT5G61140.2 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9FNQ1\|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14; TrEMBL-Plants: tr\|K7KW51\|K7KW51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0188900	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 PF00270 PF00271 PF02889 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF16 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18020 cd18022 cd18795 mobidb-lite	35
LotjaGi1g1v0188900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT5G61140.2 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9FNQ1\|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14; TrEMBL-Plants: tr\|A0A0B2Q999\|A0A0B2Q999_GLYSO Activating signal cointegrator 1 complex subunit 3; Found in the gene: LotjaGi1g1v0188900	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 PF00270 PF00271 PF02889 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF16 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18020 cd18022 cd18795 mobidb-lite	35
LotjaGi1g1v0553600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT1G59760.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|Q9XIF2\|MTR4_ARATH DExH-box ATP-dependent RNA helicase DExH9; TrEMBL-Plants: tr\|A0A0B2QTI2\|A0A0B2QTI2_GLYSO Superkiller viralicidic activity 2-like 2; Found in the gene: LotjaGi1g1v0553600	Domains Coil G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR012961 IPR025696 IPR027417 PF00271 PF08148 PF13234 PS51194 PTHR12131 PTHR12131:SF7 SM00490 SM01142 SSF52540 cd18795	19
LotjaGi1g1v0553600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT1G59760.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|Q9XIF2\|MTR4_ARATH DExH-box ATP-dependent RNA helicase DExH9; TrEMBL-Plants: tr\|V7AZU7\|V7AZU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0553600	Domains Coil G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 PF00270 PF00271 PF08148 PF13234 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF7 SM00487 SM00490 SM01142 SSF52540 cd18024 cd18795 mobidb-lite	28
LotjaGi1g1v0609800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Helicase, putative; TAIR: AT3G27730.1 DNA helicase ROCK-N-ROLLERS; Swiss-Prot: sp\|Q5D892\|MER3_ARATH DExH-box ATP-dependent RNA helicase DExH17; TrEMBL-Plants: tr\|A0A072UBW0\|A0A072UBW0_MEDTR ATP-binding protein; Found in the gene: LotjaGi1g1v0609800_LC	Domains G3DSA:3.40.50.300 IPR011545 IPR014001 IPR027417 PF00270 PS51192 PTHR12131 PTHR12131:SF9 SSF52540 cd18023	10
LotjaGi2g1v0259000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT5G39840.1 ATP-dependent RNA helicase; Swiss-Prot: sp\|F4KFV7\|SUV3L_ARATH DExH-box ATP-dependent RNA helicase DExH18, mitochondrial; TrEMBL-Plants: tr\|A0A1J7FQS0\|A0A1J7FQS0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0259000	Domains G3DSA:1.20.272.40 G3DSA:1.20.58.1080 G3DSA:3.40.50.300 IPR001650 IPR014001 IPR022192 IPR027417 IPR041082 PF00271 PF12513 PF18147 PS51192 PS51194 PTHR12131 PTHR12131:SF1 SM00490 SSF52540 cd17913 cd18805 mobidb-lite	20
LotjaGi2g1v0453500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT4G14790.1 ATP-dependent RNA helicase; Swiss-Prot: sp\|Q9SMX1\|SUV3M_ARATH DExH-box ATP-dependent RNA helicase DExH16, mitochondrial; TrEMBL-Plants: tr\|I1LFV4\|I1LFV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0453500	Domains G3DSA:1.20.272.40 G3DSA:1.20.58.1080 G3DSA:3.40.50.300 IPR001650 IPR014001 IPR022192 IPR027417 IPR041082 PF00271 PF12513 PF18147 PS51192 PS51194 PTHR12131 PTHR12131:SF2 SM00490 SSF52540 cd17913 cd18805	19
LotjaGi3g1v0141500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|A0A0L9UIS3\|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 IPR041094 PF00270 PF00271 PF02889 PF18149 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF12 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18019 cd18021 cd18795 mobidb-lite	37
LotjaGi3g1v0141500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|A0A0L9UIS3\|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 IPR041094 PF00270 PF00271 PF02889 PF18149 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF12 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 cd18019 cd18021 cd18795 mobidb-lite	37
LotjaGi3g1v0141500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|A0A0L9UIS3\|A0A0L9UIS3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0141500	Domains Coil G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR003593 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 PF00270 PF00271 PF02889 PIRSF039073 PS51192 PS51194 PTHR12131 PTHR12131:SF12 SM00382 SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 SignalP-noTM cd18019 cd18021 cd18795	35
LotjaGi4g1v0439700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|Q9ZVW2\|HEN2_ARATH DExH-box ATP-dependent RNA helicase DExH10; TrEMBL-Plants: tr\|I1KPQ5\|I1KPQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439700	Domains Coil G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 PF00270 PF00271 PF08148 PF13234 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF13 SM00487 SM00490 SM01142 SSF52540 cd13154 cd18024 cd18795 mobidb-lite	29
LotjaGi4g1v0439700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|Q9ZVW2\|HEN2_ARATH DExH-box ATP-dependent RNA helicase DExH10; TrEMBL-Plants: tr\|I1KPQ5\|I1KPQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439700	Domains Coil G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 PF00270 PF00271 PF08148 PF13234 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF13 SM00487 SM00490 SM01142 SSF52540 cd13154 cd18024 cd18795 mobidb-lite	29
LotjaGi5g1v0347000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	U5 small nuclear ribonucleoprotein helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|A0A067DX77\|A0A067DX77_CITSI Uncharacterized protein; Found in the gene: LotjaGi5g1v0347000_LC	Domains IPR041094 PF18149 PTHR12131 PTHR12131:SF12	4
LotjaGi5g1v0347000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp\|Q9SYP1\|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr\|A0A0B2R3L5\|A0A0B2R3L5_GLYSO U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi5g1v0347000_LC	Domains G3DSA:1.10.10.2530 G3DSA:1.10.150.20 G3DSA:1.10.3380.10 G3DSA:2.60.40.150 G3DSA:3.40.50.300 IPR001650 IPR004179 IPR011545 IPR014001 IPR014756 IPR027417 IPR035892 IPR036390 NON_CYTOPLASMIC_DOMAIN PF00270 PF00271 PF02889 PS51192 PS51194 PTHR12131 PTHR12131:SF12 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00487 SM00490 SM00973 SSF158702 SSF46785 SSF52540 SSF81296 SignalP-noTM cd18019 cd18795	35
LotjaGi6g1v0134200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT3G46960.2 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|F4JAA5\|SKI2_ARATH DExH-box ATP-dependent RNA helicase DExH11; TrEMBL-Plants: tr\|I1N032\|I1N032_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134200	Domains G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 IPR040801 PF00270 PF08148 PF13234 PF17911 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF15 SM00487 SM00490 SM01142 SSF52540 cd18027 cd18795 mobidb-lite	28
LotjaGi6g1v0134200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT3G46960.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|F4JAA5\|SKI2_ARATH DExH-box ATP-dependent RNA helicase DExH11; TrEMBL-Plants: tr\|I1N032\|I1N032_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134200	Domains G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 IPR040801 PF00270 PF08148 PF13234 PF17911 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF15 SM00487 SM00490 SM01142 SSF52540 cd18027 cd18795 mobidb-lite	28
LotjaGi6g1v0134200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT3G46960.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|F4JAA5\|SKI2_ARATH DExH-box ATP-dependent RNA helicase DExH11; TrEMBL-Plants: tr\|A0A0B2PAN8\|A0A0B2PAN8_GLYSO Helicase SKI2W; Found in the gene: LotjaGi6g1v0134200	Domains G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 IPR012961 PF08148 PTHR12131 PTHR12131:SF15 SM01142	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SM01142	SMART	1	4.55