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Lj2g3v1058030.1

Overview

Field Value
Gene ID Lj2g3v1058030
Transcript ID Lj2g3v1058030.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Cicer arietinum] gi|502090935|ref|XP_004489388.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
58 90 33 – –
PANTHER
PTHR12131:SF1
141 800 660 0 –
PANTHER
PTHR12131
141 800 660 0 –
ProSiteProfiles
PS51192
288 404 117 10.056
IPR014001
Gene3D
G3DSA:3.40.50.300
291 403 113 1.20E-05
IPR027417
SUPERFAMILY
SSF52540
294 563 270 1.29E-29
IPR027417
CDD
cd00046
300 403 104 3.96E-05 –
CDD
cd00079
432 562 131 4.10E-13 –
ProSiteProfiles
PS51194
444 600 157 11.759
IPR001650
Pfam
PF00271
453 562 110 1.40E-12
IPR001650
Gene3D
G3DSA:3.40.50.300
461 562 102 1.20E-12
IPR027417
SMART
SM00490
468 562 95 5.30E-16
IPR001650
Pfam
PF12513
708 754 47 2.00E-12
IPR022192
MobiDBLite
mobidb-lite
760 808 49 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016817
Molecular function Hydrolase activity, acting on acid anhydrides Catalysis of the hydrolysis of any acid anhydride.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj2g3v1058030.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1058030.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.