Domain Predictions — View

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IPR025300

Source: InterPro

Description

IPR025300 is a Beta-galactosidase jelly roll domain.

<p>This domain is found in beta-galactosidase enzymes, mainly from the glycosyl hydrolase 35 family. It has a jelly roll fold [[cite:PUB00031444]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0193529.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: beta-galactosidase 17-like [Cicer arietinum] gi\|502081330\|ref\|XP_004486833.1\|	Domains G3DSA:2.60.120.260 IPR001944 IPR008979 IPR025300 NON_CYTOPLASMIC_DOMAIN PF13364 PTHR23421 PTHR23421:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SignalP-noTM_EUK TMhelix	15
Lj0g3v0193529.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: beta-galactosidase 17-like [Cicer arietinum] gi\|502081330\|ref\|XP_004486833.1\|	Domains G3DSA:2.60.120.260 IPR001944 IPR008979 IPR025300 PF13364 PTHR23421 PTHR23421:SF13 SSF49785	8
Lj0g3v0193529.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: beta-galactosidase 17-like [Cicer arietinum] gi\|502081330\|ref\|XP_004486833.1\|	Domains G3DSA:2.60.120.260 IPR001944 IPR008979 IPR025300 PF13364 PTHR23421 PTHR23421:SF13 SSF49785	8
Lj0g3v0193529.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: beta-galactosidase 17-like [Cicer arietinum] gi\|502081330\|ref\|XP_004486833.1\|	Domains G3DSA:2.60.120.260 IPR001944 IPR008979 IPR025300 NON_CYTOPLASMIC_DOMAIN PF13364 PTHR23421 PTHR23421:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SignalP-noTM_EUK	14
Lj4g3v2826850.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: beta-galactosidase 6-like [Glycine max] gi\|356527530\|ref\|XP_003532362.1\|	Domains G3DSA:2.60.120.260 IPR001944 IPR008979 IPR025300 PF13364 PR00742 PTHR23421 PTHR23421:SF73 SSF49785	9
Lj4g3v2826850.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: beta-galactosidase 6-like [Glycine max] gi\|356527530\|ref\|XP_003532362.1\|	Domains G3DSA:2.60.120.260 G3DSA:3.20.20.80 IPR001944 IPR008979 IPR013781 IPR017853 IPR019801 IPR025300 IPR031330 NON_CYTOPLASMIC_DOMAIN PF01301 PF13364 PR00742 PS01182 PTHR23421 PTHR23421:SF73 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SSF51445 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix	25
LotjaGi1g1v0324000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-galactosidase; TAIR: AT5G63800.1 Glycosyl hydrolase family 35 protein; Swiss-Prot: sp\|Q9FFN4\|BGAL6_ARATH Beta-galactosidase 6; TrEMBL-Plants: tr\|I1KBP5\|I1KBP5_SOYBN Beta-galactosidase; Found in the gene: LotjaGi1g1v0324000	Domains G3DSA:2.60.120.260 G3DSA:3.20.20.80 IPR001944 IPR008979 IPR017853 IPR019801 IPR025300 IPR031330 IPR041392 NON_CYTOPLASMIC_DOMAIN PF01301 PF13364 PF17834 PR00742 PS01182 PTHR23421 PTHR23421:SF151 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SSF51445 SignalP-noTM	24
LotjaGi1g1v0559100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-galactosidase; TAIR: AT2G16730.1 glycosyl hydrolase family 35 protein; Swiss-Prot: sp\|Q9SCU9\|BGA13_ARATH Beta-galactosidase 13; TrEMBL-Plants: tr\|G7J8I0\|G7J8I0_MEDTR Beta-galactosidase; Found in the gene: LotjaGi1g1v0559100	Domains G3DSA:2.60.120.260 G3DSA:2.60.120.740 G3DSA:3.20.20.80 IPR000922 IPR001944 IPR008979 IPR017853 IPR019801 IPR025300 IPR031330 IPR041392 IPR043159 NON_CYTOPLASMIC_DOMAIN PF01301 PF02140 PF13364 PF17834 PR00742 PS01182 PS50228 PTHR23421 PTHR23421:SF136 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SSF51445 SignalP-TM TMhelix	30
LotjaGi3g1v0521000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-galactosidase; TAIR: AT2G16730.1 glycosyl hydrolase family 35 protein; Swiss-Prot: sp\|Q9SCU9\|BGA13_ARATH Beta-galactosidase 13; TrEMBL-Plants: tr\|G7JNE5\|G7JNE5_MEDTR Beta-galactosidase; Found in the gene: LotjaGi3g1v0521000	Domains G3DSA:2.60.120.260 G3DSA:2.60.120.740 G3DSA:3.20.20.80 IPR000922 IPR001944 IPR008979 IPR017853 IPR019801 IPR025300 IPR031330 IPR041392 IPR043159 NON_CYTOPLASMIC_DOMAIN PF01301 PF02140 PF13364 PF17834 PR00742 PS01182 PS50228 PTHR23421 PTHR23421:SF136 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SSF51445 SignalP-TM SignalP-noTM	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SignalP-noTM	SignalP_GRAM_NEGATIVE	1	11.11