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IPR030020

Source: InterPro

Description

IPR030020 is a .

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004419
Molecular function Hydroxymethylglutaryl-CoA lyase activity Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA.
Subterm of
GO:0005739
Cellular component Mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
Subterm of
GO:0046951
Biological process Ketone body biosynthetic process The chemical reactions and pathways resulting in the formation of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Biosynthesis involves the formation of hydroxymethylglutaryl-CoA, which is cleaved to acetate and acetyl-CoA.
Subterm of

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0661300.1
– 2-isopropylmalate synthase 2; TAIR: AT2G26800.5 Aldolase superfamily protein; Swiss-Prot: sp|O81027|HMGCL_ARATH Hydroxymethylglutaryl-CoA lyase, mitochondrial; TrEMBL-Plants: tr|I1N8Q3|I1N8Q3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0661300
Domains
15
LotjaGi1g1v0661300.2
– 2-isopropylmalate synthase 2; TAIR: AT2G26800.5 Aldolase superfamily protein; Swiss-Prot: sp|O81027|HMGCL_ARATH Hydroxymethylglutaryl-CoA lyase, mitochondrial; TrEMBL-Plants: tr|A0A0R0EW28|A0A0R0EW28_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0661300
Domains
10
LotjaGi6g1v0177500.1
– 2-isopropylmalate synthase; TAIR: AT2G26800.1 Aldolase superfamily protein; Swiss-Prot: sp|O81027|HMGCL_ARATH Hydroxymethylglutaryl-CoA lyase, mitochondrial; TrEMBL-Plants: tr|A0A151T0C4|A0A151T0C4_CAJCA Putative 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2; Found in the gene: LotjaGi6g1v0177500
Domains
11
LotjaGi6g1v0177500.2
– 2-isopropylmalate synthase; TAIR: AT2G26800.1 Aldolase superfamily protein; Swiss-Prot: sp|O81027|HMGCL_ARATH Hydroxymethylglutaryl-CoA lyase, mitochondrial; TrEMBL-Plants: tr|A0A151T0C4|A0A151T0C4_CAJCA Putative 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2; Found in the gene: LotjaGi6g1v0177500
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 25.00