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IPR034878

Source: InterPro

Description

IPR034878 is a Plant La-related protein, RNA recognition motif.

<p>This entry represents the RNA recognition motif (RRM) of plant La-like proteins related to the La autoantigen. A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes [[cite:PUB00084549]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0800900.1
– La; TAIR: AT2G43970.1 RNA-binding protein; Swiss-Prot: sp|O80567|LRP6B_ARATH La-related protein 6B; TrEMBL-Plants: tr|I1NCU5|I1NCU5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0800900
Domains
22
LotjaGi4g1v0071000.1
– La; TAIR: AT3G19090.1 RNA-binding protein; Swiss-Prot: sp|Q9LHL3|LRP6C_ARATH La-related protein 6C; TrEMBL-Plants: tr|G7JMI2|G7JMI2_MEDTR LA-related protein 6 LA RNA-binding domain protein; Found in the gene: LotjaGi4g1v0071000
Domains
25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 50.00