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IPR035655 is a 116kDa U5 small nuclear ribonucleoprotein component, C-terminal.
<p>This domain is found in the C-terminal portion of the spliceosomal human 116kDa U5 small nuclear ribonucleoprotein (snRNP) protein (U5-116kDa), and its yeast counterpart Snu114p. This domain is homologous to the C-terminal domain of the eukaryotic translational elongation factor EF-2 [[cite:PUB00076138]]. Yeast Snu114p is a GTPase component of U5 snRNP essential for pre-mRNA splicing [[cite:PUB00054098], [cite:PUB00085814], [cite:PUB00085880]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Elongation factor like protein; TAIR: AT1G06220.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp|Q9LNC5|CLO_ARATH 110 kDa U5 small nuclear ribonucleoprotein component CLO; TrEMBL-Plants: tr|G7JHS5|G7JHS5_MEDTR Elongation factor EF-Tu-like protein; Found in the gene: LotjaGi4g1v0282200 | 40 | ||
| – | Elongation factor like protein; TAIR: AT1G06220.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp|Q9LNC5|CLO_ARATH 110 kDa U5 small nuclear ribonucleoprotein component CLO; TrEMBL-Plants: tr|V7CCM3|V7CCM3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0282200 | 39 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd16264 | CDD | 1 | 50.00 |