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IPR039770

Source: InterPro

Description

IPR039770 is a Ribosome biogenesis protein Rpf2.

<p>Rpf2 is a conserved protein essential for the maturation of 25 S rRNA and the 60 S ribosomal subunit assembly [[cite:PUB00020277]]. It is part of the complex (Rpf2/Rrs1/rpL5/rpL11) that functions in intermediate stages of 66S preribosome maturation and assembles into 90S preribosomes containing 35S pre-rRNA [[cite:PUB00090083]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000027
Biological process Ribosomal large subunit assembly The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.
Subterm of
Part of
GO:0000470
Biological process Maturation of LSU-rRNA Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.
Subterm of
Part of
GO:0019843
Molecular function RRNA binding Interacting selectively and non-covalently with ribosomal RNA.
Subterm of

Associated Lotus transcripts 1

Transcript Name Description Predicted domains Domain count
LotjaGi5g1v0091500.1
– Ribosome production factor 2 like; TAIR: AT3G23620.1 Ribosomal RNA processing Brix domain protein; Swiss-Prot: sp|Q9AWM9|RPF2_ORYSJ Ribosome production factor 2 homolog; TrEMBL-Plants: tr|A0A1J7IBE3|A0A1J7IBE3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0091500
Domains
8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 100.00