Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR041670

Source: InterPro

Description

IPR041670 is a Zinc knuckle.

<p>This Zinc knuckle is found in FAM90A and transcription initiation factor TFIID proteins.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi2g1v0344200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp\|Q8LRK9\|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr\|I1L578\|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200	Domains Coil G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR009067 IPR018359 IPR022591 IPR029071 IPR036427 IPR036741 IPR040240 IPR041670 PF00240 PF00439 PF09247 PF12157 PF15288 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47055 SSF47370 SSF54236 cd04369 cd17064 mobidb-lite	32
LotjaGi2g1v0344200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp\|Q8LRK9\|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr\|I1L578\|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200	Domains Coil G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR009067 IPR018359 IPR022591 IPR029071 IPR036427 IPR036741 IPR040240 IPR041670 PF00240 PF00439 PF09247 PF12157 PF15288 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47055 SSF47370 SSF54236 cd04369 cd17064 mobidb-lite	32
LotjaGi2g1v0344200.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp\|Q8LRK9\|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr\|K7LF91\|K7LF91_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200	Domains Coil G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR018359 IPR022591 IPR029071 IPR036427 IPR040240 IPR041670 PF00240 PF00439 PF12157 PF15288 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47370 SSF54236 cd04369 cd17064 mobidb-lite	28
LotjaGi2g1v0344200.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp\|Q8LRK9\|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr\|K7LF91\|K7LF91_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200	Domains Coil G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR018359 IPR022591 IPR029071 IPR036427 IPR040240 IPR041670 PF00240 PF00439 PF12157 PF15288 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47370 SSF54236 cd04369 cd17064 mobidb-lite	28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00