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PF00439

Description

Bromodomain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Associated Lotus transcripts 78

Transcript Name Description Predicted domains Domain count
PREDICTED: transcription factor GTE1-like [Cicer arietinum] gi|502086469|ref|XP_004488228.1| 13
Bromodomain-containing RNA-binding protein [Medicago truncatula] gi|357518619|ref|XP_003629598.1| 8
PREDICTED: transcription factor GTE1-like isoform X1 [Cicer arietinum] gi|502154173|ref|XP_004509610.1| 14
PREDICTED: bromodomain and WD repeat-containing protein 1-like [Cicer arietinum] gi|502155569|ref|XP_004510122.1| 11
Bromodomain-containing protein [Medicago truncatula] gi|357494567|ref|XP_003617572.1| 14
Bromodomain-containing protein [Medicago truncatula] gi|357494567|ref|XP_003617572.1| 11
PREDICTED: transcription factor GTE4-like isoform X1 [Cicer arietinum] gi|502143906|ref|XP_004505511.1| 15
PREDICTED: transcription factor GTE10-like [Glycine max] gi|356508786|ref|XP_003523135.1| 18
PREDICTED: transcription factor GTE10-like [Glycine max] gi|356508786|ref|XP_003523135.1| 15
Bromodomain-containing protein [Ricinus communis] gi|255539242|ref|XP_002510686.1| 14
PREDICTED: transcription factor GTE8-like [Glycine max] gi|356560519|ref|XP_003548539.1| 15
PREDICTED: transcription factor GTE8-like [Glycine max] gi|356560519|ref|XP_003548539.1| 15
PREDICTED: histone acetyltransferase GCN5-like [Cicer arietinum] gi|502109822|ref|XP_004493735.1| 19
PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Cicer arietinum] gi|502090713|ref|XP_004489317.1| 32
PREDICTED: transcription initiation factor TFIID subunit 1-A-like [Glycine max] gi|356529777|ref|XP_003533464.1| 24
PREDICTED: transcription initiation factor TFIID subunit 1-A-like [Glycine max] gi|356529777|ref|XP_003533464.1| 28
PREDICTED: transcription initiation factor TFIID subunit 1-A-like isoform X3 [Cicer arietinum] gi|502162054|ref|XP_004512374.1| 17
Global transcription factor group [Medicago truncatula] gi|357472985|ref|XP_003606777.1| 10
Bromodomain protein [Medicago truncatula] gi|357451009|ref|XP_003595781.1| 9
PREDICTED: transcription factor GTE4-like [Glycine max] gi|356546972|ref|XP_003541893.1| 14
PREDICTED: ATPase family AAA domain-containing protein At1g05910-like [Cicer arietinum] gi|502148941|ref|XP_004507330.1| 14
PREDICTED: transcription factor GTE7-like isoform X1 [Cicer arietinum] gi|502142265|ref|XP_004504873.1| 15
PREDICTED: transcription factor GTE7-like isoform X1 [Cicer arietinum] gi|502142265|ref|XP_004504873.1| 15
PREDICTED: transcription factor GTE8-like [Glycine max] gi|356513665|ref|XP_003525531.1| 15
PREDICTED: transcription factor GTE8-like [Glycine max] gi|356549150|ref|XP_003542960.1| 12
Bromodomain-containing protein [Medicago truncatula] gi|357459703|ref|XP_003600132.1| 13
PREDICTED: PH-interacting protein-like isoform X2 [Cicer arietinum] gi|502084839|ref|XP_004487773.1| 19
PREDICTED: transcription factor GTE10-like isoform X1 [Cicer arietinum] gi|502078499|ref|XP_004485965.1| 12
Bromodomain-containing factor [Medicago truncatula] gi|357447117|ref|XP_003593834.1| 11
Bromodomain protein [Medicago truncatula] gi|357446403|ref|XP_003593479.1| 17
10
PREDICTED: transcription factor GTE11-like [Glycine max] gi|356554838|ref|XP_003545749.1| 15
Bromodomain-containing protein [Medicago truncatula] gi|357445295|ref|XP_003592925.1| 14
Bromodomain-containing protein, putative; TAIR: AT5G55040.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3; TrEMBL-Plants: tr|A0A0L9UUY7|A0A0L9UUY7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0027400 15
Transcription factor GTE10; TAIR: AT5G63320.1 nuclear protein X1; Swiss-Prot: sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10; TrEMBL-Plants: tr|V7AWA8|V7AWA8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0235400 19
Bromodomain-containing protein; TAIR: AT1G20670.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1; TrEMBL-Plants: tr|K7KHM0|K7KHM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0566700 15
Transcription factor GTE8; TAIR: AT3G27260.4 global transcription factor group E8; Swiss-Prot: sp|Q9LK27|GTE8_ARATH Transcription factor GTE8; TrEMBL-Plants: tr|A0A0S3RVN8|A0A0S3RVN8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0619600 19
Transcription factor GTE8; TAIR: AT3G27260.4 global transcription factor group E8; Swiss-Prot: sp|Q9LK27|GTE8_ARATH Transcription factor GTE8; TrEMBL-Plants: tr|I1MLM9|I1MLM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0619700 19
Histone acetyltransferase GCN5; TAIR: AT3G54610.1 histone acetyltransferase of the GNAT family 1; Swiss-Prot: sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5; TrEMBL-Plants: tr|I1JNY5|I1JNY5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0714400 22
Histone acetyltransferase GCN5; TAIR: AT3G54610.1 histone acetyltransferase of the GNAT family 1; Swiss-Prot: sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5; TrEMBL-Plants: tr|I1JNY5|I1JNY5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0714400 22
Transcription factor GTE1; TAIR: AT2G34900.1 Transcription factor GTE6; Swiss-Prot: sp|Q84XV2|GTE1_ARATH Transcription factor GTE1; TrEMBL-Plants: tr|V7C0T4|V7C0T4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0101800 17
Methyl-CpG-binding domain-containing protein 9; TAIR: AT3G01460.1 methyl-CPG-binding domain 9; Swiss-Prot: sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9; TrEMBL-Plants: tr|I1M022|I1M022_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0248100 32
Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp|Q8LRK9|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr|I1L578|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200 30
Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp|Q8LRK9|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr|I1L578|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200 30
Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp|Q8LRK9|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr|I1L578|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200 32
Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp|Q8LRK9|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr|I1L578|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200 30
Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp|Q8LRK9|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr|I1L578|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200 32
Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp|Q8LRK9|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr|K7LF91|K7LF91_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200 28
Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp|Q8LRK9|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr|K7LF91|K7LF91_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200 28
Transcription factor GTE9; TAIR: AT5G14270.1 bromodomain and extraterminal domain protein 9; Swiss-Prot: sp|Q93YS6|GTE9_ARATH Transcription factor GTE9; TrEMBL-Plants: tr|A0A072UU92|A0A072UU92_MEDTR Uncharacterized protein; Found in the gene: LotjaGi3g1v0082300_LC 11
Transcription factor GTE4; TAIR: AT5G46550.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9LS28|GTE12_ARATH Transcription factor GTE12; TrEMBL-Plants: tr|A0A072UU92|A0A072UU92_MEDTR Uncharacterized protein; Found in the gene: LotjaGi3g1v0085900_LC 11
DNA-binding bromodomain protein, putative; TAIR: AT2G44430.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9H0E9|BRD8_HUMAN Bromodomain-containing protein 8; TrEMBL-Plants: tr|V7BVJ8|V7BVJ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0126100 22
Transcription factor GTE4; TAIR: AT1G06230.1 global transcription factor group E4; Swiss-Prot: sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4; TrEMBL-Plants: tr|K7KXX1|K7KXX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0246800 19
Transcription factor GTE4; TAIR: AT1G06230.1 global transcription factor group E4; Swiss-Prot: sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4; TrEMBL-Plants: tr|K7M2K1|K7M2K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0449500 18
ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G05910.1 cell division cycle protein 48-related / CDC48-like protein; Swiss-Prot: sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910; TrEMBL-Plants: tr|K7LT70|K7LT70_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0498000 25
ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G05910.1 cell division cycle protein 48-related / CDC48-like protein; Swiss-Prot: sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910; TrEMBL-Plants: tr|K7LT70|K7LT70_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0498000 24
ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G05910.1 cell division cycle protein 48-related / CDC48-like protein; Swiss-Prot: sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910; TrEMBL-Plants: tr|K7LT70|K7LT70_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0498000 25
ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G05910.1 cell division cycle protein 48-related / CDC48-like protein; Swiss-Prot: sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910; TrEMBL-Plants: tr|K7LT69|K7LT69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0498000 25
ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G05910.1 cell division cycle protein 48-related / CDC48-like protein; Swiss-Prot: sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910; TrEMBL-Plants: tr|K7LT69|K7LT69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0498000 25
ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G05910.1 cell division cycle protein 48-related / CDC48-like protein; Swiss-Prot: sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910; TrEMBL-Plants: tr|K7LT70|K7LT70_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0498000 25
ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G05910.1 cell division cycle protein 48-related / CDC48-like protein; Swiss-Prot: sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910; TrEMBL-Plants: tr|K7LT69|K7LT69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0498000 25
ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G05910.1 cell division cycle protein 48-related / CDC48-like protein; Swiss-Prot: sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910; TrEMBL-Plants: tr|K7LT69|K7LT69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0498000 24
Transcription factor GTE4; TAIR: AT1G73150.1 global transcription factor group E3; Swiss-Prot: sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic; TrEMBL-Plants: tr|A0A0L9VGU3|A0A0L9VGU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0042000 19
Transcription factor GTE4; TAIR: AT1G73150.1 global transcription factor group E3; Swiss-Prot: sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic; TrEMBL-Plants: tr|A0A0L9VGU3|A0A0L9VGU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0042000 19
Transcription factor GTE1; TAIR: AT2G34900.1 Transcription factor GTE6; Swiss-Prot: sp|Q84XV2|GTE1_ARATH Transcription factor GTE1; TrEMBL-Plants: tr|A0A0S3R458|A0A0S3R458_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0150600 18
Transcription factor GTE10; TAIR: AT5G63320.1 nuclear protein X1; Swiss-Prot: sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10; TrEMBL-Plants: tr|K7KMV6|K7KMV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0223700 19
Transcription factor GTE10; TAIR: AT5G63320.1 nuclear protein X1; Swiss-Prot: sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10; TrEMBL-Plants: tr|K7KMV6|K7KMV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0223700 19
Transcription factor GTE12; TAIR: AT5G46550.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9LS28|GTE12_ARATH Transcription factor GTE12; TrEMBL-Plants: tr|A0A1J7IVH6|A0A1J7IVH6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382600 14
Bromodomain-containing protein; TAIR: AT1G20670.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9H8M2|BRD9_HUMAN Bromodomain-containing protein 9; TrEMBL-Plants: tr|A0A0R0HW01|A0A0R0HW01_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0046000_LC 12
Bromodomain-containing protein; TAIR: AT5G55040.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3; TrEMBL-Plants: tr|A0A0R0F849|A0A0R0F849_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0158100 15
Transcription factor GTE1; TAIR: AT2G34900.1 Transcription factor GTE6; Swiss-Prot: sp|Q84XV2|GTE1_ARATH Transcription factor GTE1; TrEMBL-Plants: tr|A0A0S3RIF5|A0A0S3RIF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0247400 18
WD-repeat protein, putative; TAIR: AT5G49430.1 WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein; Swiss-Prot: sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1; TrEMBL-Plants: tr|K7MBB5|K7MBB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0257200 22
WD40 repeat-like protein; TAIR: AT5G49430.1 WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein; Swiss-Prot: sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1; TrEMBL-Plants: tr|K7MBB4|K7MBB4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0257200 19
Transcription factor GTE12; TAIR: AT5G46550.1 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q9LS28|GTE12_ARATH Transcription factor GTE12; TrEMBL-Plants: tr|G7ILV8|G7ILV8_MEDTR Global transcription factor group protein; Found in the gene: LotjaGi6g1v0314400 14
Bromodomain protein; TAIR: AT1G61215.1 bromodomain 4; Swiss-Prot: sp|Q9H0E9|BRD8_HUMAN Bromodomain-containing protein 8; TrEMBL-Plants: tr|A0A151T7J0|A0A151T7J0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0337000 16
Transcription factor GTE4; TAIR: AT1G73150.1 global transcription factor group E3; Swiss-Prot: sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic; TrEMBL-Plants: tr|A0A0L9VGU3|A0A0L9VGU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347400 19
Bromodomain; TAIR: AT1G58025.3 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q6DFF2|BRD4B_XENLA Bromodomain-containing protein 4B; TrEMBL-Plants: tr|A0A151T839|A0A151T839_CAJCA Bromodomain-containing protein 4; Found in the gene: LotjaGi6g1v0364000 13
Bromodomain; TAIR: AT1G58025.3 DNA-binding bromodomain-containing protein; Swiss-Prot: sp|Q6DFF2|BRD4B_XENLA Bromodomain-containing protein 4B; TrEMBL-Plants: tr|A0A151T839|A0A151T839_CAJCA Bromodomain-containing protein 4; Found in the gene: LotjaGi6g1v0364000 13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 1.28