Domain Predictions — View

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SSF47055

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v1549760.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transcription initiation factor TFIID subunit 1-A-like [Glycine max] gi\|356529777\|ref\|XP_003533464.1\|	Domains Coil G3DSA:1.10.1100.10 G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR009067 IPR018359 IPR022591 IPR029071 PF00240 PF00439 PF09247 PF12157 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47055 SSF47370 SSF54236 cd01769 cd04369 mobidb-lite	28
LotjaGi2g1v0344200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp\|Q8LRK9\|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr\|I1L578\|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200	Domains Coil G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR009067 IPR018359 IPR022591 IPR029071 IPR036427 IPR036741 IPR040240 PF00240 PF00439 PF09247 PF12157 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47055 SSF47370 SSF54236 cd04369 cd17064 mobidb-lite	30
LotjaGi2g1v0344200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp\|Q8LRK9\|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr\|I1L578\|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200	Domains Coil G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR009067 IPR018359 IPR022591 IPR029071 IPR036427 IPR036741 IPR040240 PF00240 PF00439 PF09247 PF12157 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47055 SSF47370 SSF54236 cd04369 cd17064 mobidb-lite	30
LotjaGi2g1v0344200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp\|Q8LRK9\|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr\|I1L578\|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200	Domains Coil G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR009067 IPR018359 IPR022591 IPR029071 IPR036427 IPR036741 IPR040240 IPR041670 PF00240 PF00439 PF09247 PF12157 PF15288 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47055 SSF47370 SSF54236 cd04369 cd17064 mobidb-lite	32
LotjaGi2g1v0344200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp\|Q8LRK9\|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr\|I1L578\|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200	Domains Coil G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR009067 IPR018359 IPR022591 IPR029071 IPR036427 IPR036741 IPR040240 PF00240 PF00439 PF09247 PF12157 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47055 SSF47370 SSF54236 cd04369 cd17064 mobidb-lite	30
LotjaGi2g1v0344200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription initiation factor tfiid subunit 1; TAIR: AT1G32750.1 HAC13 protein (HAC13); Swiss-Prot: sp\|Q8LRK9\|TAF1_ARATH Transcription initiation factor TFIID subunit 1; TrEMBL-Plants: tr\|I1L578\|I1L578_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0344200	Domains Coil G3DSA:1.20.920.10 G3DSA:3.10.20.90 IPR000626 IPR001487 IPR009067 IPR018359 IPR022591 IPR029071 IPR036427 IPR036741 IPR040240 IPR041670 PF00240 PF00439 PF09247 PF12157 PF15288 PR00503 PS00633 PS50014 PS50053 PTHR13900 PTHR13900:SF0 SM00213 SM00297 SSF47055 SSF47370 SSF54236 cd04369 cd17064 mobidb-lite	32

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	16.67