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IPR042116 is a GTP-binding protein TypA/BipA, C-terminal.
<p>The translational GTPase BipA (also known as TypA or YihK) regulates the expression of virulence and pathogenicity factors in several eubacteria. BipA-dependent expression of virulence factors occurs under starvation conditions, such as encountered during infection of a host. BipA is composed of five domains. Domain I consists of a central six-stranded β-sheet surrounded by five α-helices, which is characteristic for the G domain found in translational GTPases. Domain II has the distinctive OB-fold of oligonucleotide/oligosaccharide binding domains. Domains III and V both have the same double-split β-α-β fold. The C-terminal domain of BipA spatially occupies a position between domains III and V and consists of a unique mixed α+β fold composed of eight β-sheets and two α-helices [[cite:PUB00092580]].</p> <p>This superfamily represents the C-terminal domain found in GTP-binding protein TypA/BipA.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Elongation factor 4; TAIR: AT5G13650.1 elongation factor family protein; Swiss-Prot: sp|P72749|TYPA_SYNY3 GTP-binding protein TypA/BipA homolog; TrEMBL-Plants: tr|A0A0L9TVK2|A0A0L9TVK2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi0g1v0000300 | 35 | ||
| – | Elongation factor 4; TAIR: AT2G31060.2 elongation factor family protein; Swiss-Prot: sp|O25225|TYPA_HELPY GTP-binding protein TypA/BipA homolog; TrEMBL-Plants: tr|A0A0S3SB66|A0A0S3SB66_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0244900 | 39 | ||
| – | Elongation factor G; TAIR: AT2G31060.1 elongation factor family protein; Swiss-Prot: sp|O25225|TYPA_HELPY GTP-binding protein TypA/BipA homolog; TrEMBL-Plants: tr|A0A151TP89|A0A151TP89_CAJCA GTP-binding protein TypA/BipA isogeny; Found in the gene: LotjaGi3g1v0244900 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd16263 | CDD | 1 | 33.33 |