Domain Predictions — View

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PF00890

Source: Pfam

Description

FAD binding domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v1012870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: L-aspartate oxidase-like [Cicer arietinum] gi\|502090596\|ref\|XP_004489279.1\|	Domains G3DSA:3.50.50.60 IPR003953 IPR023753 PF00890 PR00411 PTHR11632 PTHR11632:SF27 SSF51905	8
Lj2g3v1012870.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: L-aspartate oxidase-like [Cicer arietinum] gi\|502090596\|ref\|XP_004489279.1\|	Domains G3DSA:3.50.50.60 G3DSA:3.90.700.10 IPR003953 IPR005288 IPR023753 IPR027477 PF00890 PR00368 PTHR11632 PTHR11632:SF27 SSF51905 SSF56425 TIGR00551	13
Lj2g3v1012880.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: L-aspartate oxidase 1-like [Glycine max] gi\|356511664\|ref\|XP_003524543.1\|	Domains G3DSA:1.20.58.100 G3DSA:3.50.50.60 G3DSA:3.90.700.10 IPR003953 IPR015939 IPR023753 IPR027477 PF00890 PF02910 PTHR11632 PTHR11632:SF27 SSF46977 SSF51905 SSF56425 SignalP-noTM_EUK	15
Lj4g3v0948900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: succinate dehydrogenase [ubiquinone] gi\|356498373\|ref\|XP_003518027.1\|	Domains G3DSA:1.20.58.100 G3DSA:3.50.50.60 G3DSA:3.90.700.10 IPR003952 IPR003953 IPR011281 IPR014006 IPR015939 IPR023753 IPR027477 IPR030664 PF00890 PF02910 PIRSF000171 PS00504 PTHR11632 PTHR11632:SF54 SSF46977 SSF51905 SSF56425 TIGR01812 TIGR01816	22
LotjaGi2g1v0246300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; TAIR: AT5G14760.1 L-aspartate oxidase; Swiss-Prot: sp\|Q94AY1\|NADB_ARATH L-aspartate oxidase, chloroplastic; TrEMBL-Plants: tr\|A0A0B2R629\|A0A0B2R629_GLYSO L-aspartate oxidase; Found in the gene: LotjaGi2g1v0246300	Domains G3DSA:1.20.58.100 G3DSA:3.50.50.60 G3DSA:3.90.700.10 IPR003953 IPR005288 IPR015939 IPR027477 IPR036188 IPR037099 PF00890 PF02910 PR00368 PTHR42716 PTHR42716:SF2 SSF46977 SSF51905 SSF56425 TIGR00551	18
LotjaGi2g1v0246300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; TAIR: AT5G14760.1 L-aspartate oxidase; Swiss-Prot: sp\|Q94AY1\|NADB_ARATH L-aspartate oxidase, chloroplastic; TrEMBL-Plants: tr\|I1K1F9\|I1K1F9_SOYBN L-aspartate oxidase; Found in the gene: LotjaGi2g1v0246300	Domains G3DSA:1.20.58.100 G3DSA:3.50.50.60 G3DSA:3.90.700.10 IPR003953 IPR005288 IPR015939 IPR027477 IPR036188 IPR037099 PF00890 PF02910 PTHR42716 PTHR42716:SF2 SSF46977 SSF51905 SSF56425 TIGR00551	17
LotjaGi4g1v0116700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; TAIR: AT5G66760.1 succinate dehydrogenase 1-1; Swiss-Prot: sp\|O82663\|SDHA1_ARATH Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial; TrEMBL-Plants: tr\|I1JCQ7\|I1JCQ7_SOYBN Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Found in the gene: LotjaGi4g1v0116700	Domains G3DSA:1.20.58.100 G3DSA:3.50.50.60 G3DSA:3.90.700.10 G3DSA:4.10.80.40 IPR003952 IPR003953 IPR011281 IPR014006 IPR015939 IPR027477 IPR036188 IPR037099 PF00890 PF02910 PIRSF000171 PS00504 PTHR11632 PTHR11632:SF76 SSF46977 SSF51905 SSF56425 TIGR01812 TIGR01816	23
LotjaGi4g1v0116700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; TAIR: AT5G66760.1 succinate dehydrogenase 1-1; Swiss-Prot: sp\|O82663\|SDHA1_ARATH Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial; TrEMBL-Plants: tr\|I1JCQ7\|I1JCQ7_SOYBN Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Found in the gene: LotjaGi4g1v0116700	Domains G3DSA:1.20.58.100 G3DSA:3.50.50.60 G3DSA:3.90.700.10 G3DSA:4.10.80.40 IPR003952 IPR003953 IPR011281 IPR014006 IPR015939 IPR027477 IPR036188 IPR037099 PF00890 PF02910 PIRSF000171 PS00504 PTHR11632 PTHR11632:SF76 SSF46977 SSF51905 SSF56425 TIGR01812 TIGR01816	23
LotjaGi4g1v0116700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; TAIR: AT5G66760.1 succinate dehydrogenase 1-1; Swiss-Prot: sp\|O82663\|SDHA1_ARATH Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial; TrEMBL-Plants: tr\|I1JCQ7\|I1JCQ7_SOYBN Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Found in the gene: LotjaGi4g1v0116700	Domains G3DSA:1.20.58.100 G3DSA:3.50.50.60 G3DSA:3.90.700.10 G3DSA:4.10.80.40 IPR003952 IPR003953 IPR011281 IPR014006 IPR015939 IPR027477 IPR036188 IPR037099 PF00890 PF02910 PIRSF000171 PS00504 PTHR11632 PTHR11632:SF76 SSF46977 SSF51905 SSF56425 TIGR01812 TIGR01816	23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TIGR01816	TIGRFAM	1	11.11