Domain Predictions — View

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PF02672

Source: Pfam

Description

CP12 domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 10

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v3385810.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glyceraldehyde-3-phosphate dehydrogenase B [Pyrus x bretschneideri] gi\|381393062\|gb\|AFG28405.1\|	Domains G3DSA:3.30.360.10 IPR003823 IPR020829 IPR020831 PF02672 PF02800 PTHR10836 PTHR10836:SF39 SSF55347	9
Lj1g3v3385810.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Cicer arietinum] gi\|502131017\|ref\|XP_004500847.1\|	Domains G3DSA:3.30.360.10 G3DSA:3.40.50.720 IPR003823 IPR016040 IPR020828 IPR020829 IPR020830 IPR020831 PF00044 PF02672 PF02800 PIRSF000149 PR00078 PS00071 PTHR10836 PTHR10836:SF39 SM00846 SSF51735 SSF55347	19
Lj1g3v4862670.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CP12 [Pisum sativum] gi\|1617206\|emb\|CAA96570.1\|	Domains IPR003823 NON_CYTOPLASMIC_DOMAIN PF02672 PTHR33921 PTHR33921:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01093 SignalP-TM_GRAM_POSITIVE mobidb-lite	12
Lj3g3v0989840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: kinesin-like protein KIFC3-like [Cicer arietinum] gi\|502088052\|ref\|XP_004488714.1\|	Domains Coil G3DSA:3.40.850.10 IPR001752 IPR003823 IPR019821 IPR027417 IPR027640 PF00225 PF02672 PR00380 PS00411 PS50067 PTHR24115 PTHR24115:SF339 SM00129 SSF52540 cd01366	17
Lj5g3v1598460.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Calvin cycle protein CP12 [Medicago truncatula] gi\|357442247\|ref\|XP_003591401.1\|	Domains IPR003823 NON_CYTOPLASMIC_DOMAIN PF02672 PTHR33921 PTHR33921:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01093 mobidb-lite	11
Lj5g3v1598470.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Cicer arietinum] gi\|502117696\|ref\|XP_004495904.1\|	Domains IPR003823 NON_CYTOPLASMIC_DOMAIN PF02672 PTHR33921 PTHR33921:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	10
LotjaGi1g1v0567800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glyceraldehyde-3-phosphate dehydrogenase; TAIR: AT1G42970.1 glyceraldehyde-3-phosphate dehydrogenase B subunit; Swiss-Prot: sp\|P25857\|G3PB_ARATH Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic; TrEMBL-Plants: tr\|I1K7A9\|I1K7A9_SOYBN Glyceraldehyde-3-phosphate dehydrogenase; Found in the gene: LotjaGi1g1v0567800	Domains G3DSA:3.30.360.10 G3DSA:3.40.50.720 IPR003823 IPR020828 IPR020829 IPR020831 IPR036291 PF00044 PF02672 PF02800 PR00078 PTHR43148 PTHR43148:SF5 SM00846 SSF51735 SSF55347	16
LotjaGi1g1v0567800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glyceraldehyde-3-phosphate dehydrogenase; TAIR: AT1G42970.1 glyceraldehyde-3-phosphate dehydrogenase B subunit; Swiss-Prot: sp\|P25857\|G3PB_ARATH Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic; TrEMBL-Plants: tr\|I1K7A9\|I1K7A9_SOYBN Glyceraldehyde-3-phosphate dehydrogenase; Found in the gene: LotjaGi1g1v0567800	Domains G3DSA:3.30.360.10 G3DSA:3.40.50.720 IPR003823 IPR020828 IPR020829 IPR036291 PF00044 PF02672 PF02800 PTHR43148 PTHR43148:SF5 SM00846 SSF51735 SSF55347	14
LotjaGi1g1v0759800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glyceraldehyde-3-phosphate dehydrogenase; TAIR: AT3G62410.1 CP12 domain-containing protein 2; Swiss-Prot: sp\|Q9LZP9\|CP122_ARATH Calvin cycle protein CP12-2, chloroplastic; TrEMBL-Plants: tr\|G7KST6\|G7KST6_MEDTR Calvin cycle protein CP12-1; Found in the gene: LotjaGi1g1v0759800	Domains IPR003823 IPR039314 NON_CYTOPLASMIC_DOMAIN PF02672 PTHR33921 PTHR33921:SF15 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01093 SignalP-TM mobidb-lite	13
LotjaGi5g1v0244500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glyceraldehyde-3-phosphate dehydrogenase; TAIR: AT3G62410.1 CP12 domain-containing protein 2; Swiss-Prot: sp\|Q9LZP9\|CP122_ARATH Calvin cycle protein CP12-2, chloroplastic; TrEMBL-Plants: tr\|A0A1J7H2D5\|A0A1J7H2D5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0244500	Domains IPR003823 IPR039314 NON_CYTOPLASMIC_DOMAIN PF02672 PTHR33921 PTHR33921:SF15 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01093 mobidb-lite	12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	10.00